DRSC/TRiP Functional Genomics Resources

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Protein Alignment ebd2 and TIGD3

DIOPT Version :10

Sequence 1:NP_649307.1 Gene:ebd2 / 40363 FlyBaseID:FBgn0037076 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_663771.1 Gene:TIGD3 / 220359 HGNCID:18334 Length:471 Species:Homo sapiens


Alignment Length:163 Identity:42/163 - (25%)
Similarity:69/163 - (42%) Gaps:21/163 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SRRNERNILTFYEKIAVIRYYDETNISRNSLAKMFHCCATQIRRILDKKKDLLQQLATLSEAD-A 88
            |.:.:.:.|:..|||.|:...||:.:|::.:|:.|.....||.||...|:.||        || .
Human     4 SSKKKLHALSLAEKIQVLELLDESKMSQSEVARRFQVSQPQISRICKNKEKLL--------ADWC 60

  Fly    89 SIIIEEMTRKRRKFEMSAISFLLHEW--VERCIQMQLNISIRNQKLKETAIRMAAVLNLPSFRPS 151
            |.......:::|:.:.|.|...|..|  :.|.....:...:...|.||.|..|.     ..|.||
Human    61 SGTANRERKRKRESKYSGIDEALLCWYHIARAKAWDVTGPMLLHKAKELADIMG-----QDFVPS 120

  Fly   152 YRWLSRFRNKYKYEADELGYQGENPLNQDLPVE 184
            ..||.|::.:     :.:|:...:.|....|.|
Human   121 IGWLVRWKRR-----NNVGFGARHVLAPSFPPE 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ebd2NP_649307.1 CENP-B_N 27..80 CDD:461229 17/52 (33%)
CENPB 101..166 CDD:197828 16/66 (24%)
TIGD3NP_663771.1 CENP-B_N 6..57 CDD:461229 17/58 (29%)
HTH_Tnp_Tc5 76..133 CDD:460850 16/66 (24%)
DDE_3 193..360 CDD:481203
Blue background indicates that the domain is not in the aligned region.

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