DRSC/TRiP Functional Genomics Resources

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Protein Alignment ebd2 and Jrk

DIOPT Version :10

Sequence 1:NP_649307.1 Gene:ebd2 / 40363 FlyBaseID:FBgn0037076 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_032441.4 Gene:Jrk / 16469 MGIID:106214 Length:557 Species:Mus musculus


Alignment Length:251 Identity:54/251 - (21%)
Similarity:96/251 - (38%) Gaps:60/251 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KGIKSRRNERNILTFYEKIAVIRYYDETNISRNSLAKMFHCCATQIRRILDKKKDLLQQLATLSE 85
            || |..:.:|.:||..|||.:.... |...||.:|.:.::...:.:..|...|..||:..|:...
Mouse     9 KG-KGEKRKRVVLTLKEKIDICTRL-ERGESRKALMQEYNVGMSTLYDIKAHKAQLLRFFASSDS 71

  Fly    86 ADASIIIEEMTRKRRKFEMSAISFLLHEW--VERCIQMQLNISIRNQKLKETAIRMAAVLNLPSF 148
            ..|.    |..|.....::..:..:|:||  |:|...:.::..:..:|.|:...:|.  |..|..
Mouse    72 RQAL----EQRRTLHTPKLEHLDRVLYEWFLVKRAEGIPVSGPMLIEKAKDFYKQMR--LTEPCV 130

  Fly   149 RPSYRWLSRFRNKYKYEADELGYQGENPLNQDLPVEDIIVEFKHALPNFMQRELDNPGEAISKAA 213
            . |..||.||:                              .:|.:     ::||...|..:...
Mouse   131 F-SGGWLWRFK------------------------------ARHGI-----KKLDASSEKQAADH 159

  Fly   214 VMAD-----FVNLSSENSIMSDHPEGDNEVELV-TCEPTMMSSPSSTPDAAEGEIP 263
            ..|:     |.:|::|:.:..:.....:|..|| .|      .|:|.||  :|.:|
Mouse   160 QAAEQFCGFFRSLAAEHGLSPEQVYSADETGLVWRC------LPNSAPD--DGTVP 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ebd2NP_649307.1 CENP-B_N 27..80 CDD:461229 14/52 (27%)
CENPB 101..166 CDD:197828 15/66 (23%)
JrkNP_032441.4 CENP-B_N 14..66 CDD:461229 14/52 (27%)
CENPB 83..147 CDD:197828 16/101 (16%)
DDE_1 213..382 CDD:367380
Blue background indicates that the domain is not in the aligned region.

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