DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and RAB3D

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_004274.1 Gene:RAB3D / 9545 HGNCID:9779 Length:219 Species:Homo sapiens


Alignment Length:163 Identity:74/163 - (45%)
Similarity:107/163 - (65%) Gaps:2/163 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 EDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTA 270
            :..||.|.|::::|:|.|||||.|.|:.|..:.|: |:|||||||:.|.|.....|:||||||||
Human    16 DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPA-FVSTVGIDFKVKTVYRHDKRIKLQIWDTA 79

  Fly   271 GQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSER 335
            ||||:|::|.||||.|...||:||:.|:.::..::.|..:|:.|:.::..::|:|||.|.. .||
Human    80 GQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLE-DER 143

  Fly   336 QVKREDGERLGREHNVPFMETSAKTGLNVELSF 368
            .|..|||.||..:....|.|.|||..:||:..|
Human   144 VVPAEDGRRLADDLGFEFFEASAKENINVKQVF 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 71/155 (46%)
RAB3DNP_004274.1 Rab3 22..186 CDD:206657 72/157 (46%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P63012 49..58 6/9 (67%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P63012 80..96 10/15 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..219
Blue background indicates that the domain is not in the aligned region.

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