DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and Rab6a

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_038948673.1 Gene:Rab6a / 84379 RGDID:619737 Length:211 Species:Rattus norvegicus


Alignment Length:166 Identity:71/166 - (42%)
Similarity:110/166 - (66%) Gaps:3/166 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 KVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQERFRSV 278
            |::.||:..||||||:.||....:..:| .:|:||||.:|.:.::...|:||:|||||||||||:
  Rat    15 KLVFLGEQSVGKTSLITRFMYDSFDNTY-QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly   279 THAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGE 343
            ..:|.||:...:::||:||..::.....|:.::|.....||:|:|:|||.|.: .:|||..|:||
  Rat    79 IPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLA-DKRQVSIEEGE 142

  Fly   344 RLGREHNVPFMETSAKTGLNVELSFTAVARQLKSRG 379
            |..:|.||.|:|||||.|.||: ....:|..|:::|
  Rat   143 RKAKELNVMFIETSAKAGYNVK-QLPTIASHLRTQG 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 71/166 (43%)
Rab6aXP_038948673.1 Rab6 14..173 CDD:206654 69/160 (43%)

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