DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and RABA6a

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_177505.1 Gene:RABA6a / 843698 AraportID:AT1G73640 Length:233 Species:Arabidopsis thaliana


Alignment Length:188 Identity:79/188 - (42%)
Similarity:118/188 - (62%) Gaps:18/188 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 EDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLS--TVGIDFRNKVVVVDGTRVKLQIWD 268
            |:|.|.:.|.:::|||.|||::||.||....:   .|.|  |:|::|..:.|.|....:|.||||
plant     7 EEECDYLFKAVLIGDSAVGKSNLLSRFSKDEF---RFDSKPTIGVEFAYRNVHVGDKIIKAQIWD 68

  Fly   269 TAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGS 333
            ||||||||::|.:|||.|...||:||:|.:||:|||:.||.|:|::|..:.|:||:|||:|...|
plant    69 TAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSDLRQS 133

  Fly   334 ERQVKREDGERLGREHNVPFMETSAKTGLNVELSFTA------------VARQLKSRG 379
             |:|:.::|:.|.....:.|:||||...:|||.:|..            :|.:.||.|
plant   134 -REVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIASENKSNG 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 76/180 (42%)
RABA6aNP_177505.1 Rab11_like 11..175 CDD:206660 73/167 (44%)

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