DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and RABA4C

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_199607.1 Gene:RABA4C / 834847 AraportID:AT5G47960 Length:223 Species:Arabidopsis thaliana


Alignment Length:187 Identity:77/187 - (41%)
Similarity:118/187 - (63%) Gaps:11/187 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 EFDIMGKVIMLGDSGVGKTSLLIRFRDGRY-VPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAG 271
            :.|.:.||:::|||.|||:.||.||....: :.|  .:|:|::|:.:.:.:|...:|.|||||||
plant    11 KIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIES--KATIGVEFQTRTLEIDRKTIKAQIWDTAG 73

  Fly   272 QERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQ 336
            |||:|:||.||||.|...:|:||:|.:.::|::..||.|:|.:|.:::||:|||||.|. |:.|.
plant    74 QERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDL-GTLRA 137

  Fly   337 VKREDGERLGREHNVPFMETSAKTGLNVELSF----TAVARQLKSRGY---EHGDDG 386
            |..||.:...:..|:.||||||....|||.||    |.:.|.:..:..   |.|:.|
plant   138 VPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEEGESG 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 76/181 (42%)
RABA4CNP_199607.1 Rab11_like 13..177 CDD:206660 73/166 (44%)

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