DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and RABA1e

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_193578.1 Gene:RABA1e / 827574 AraportID:AT4G18430 Length:217 Species:Arabidopsis thaliana


Alignment Length:171 Identity:76/171 - (44%)
Similarity:112/171 - (65%) Gaps:4/171 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 EDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRY-VPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDT 269
            :|::|.:.|::::|||||||::||.||....: :.|  .||:|::|..:.|.||...:|.|:|||
plant     7 DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIES--KSTIGVEFATRSVHVDEKIIKAQLWDT 69

  Fly   270 AGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSE 334
            |||||:|::|.||||.|...||:||:|...|::|:..||.|:|::...:|||:|:|||||.. ..
plant    70 AGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADLR-HL 133

  Fly   335 RQVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQL 375
            |.|..|:........|:.||||||....|||.:||.|..|:
plant   134 RAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQI 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 74/163 (45%)
RABA1eNP_193578.1 Rab11_like 11..175 CDD:206660 75/167 (45%)

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