DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab26 and RABA2c

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_190267.1 Gene:RABA2c / 823836 AraportID:AT3G46830 Length:217 Species:Arabidopsis thaliana


Alignment Length:170 Identity:71/170 - (41%)
Similarity:113/170 - (66%) Gaps:2/170 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 EDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTA 270
            :.|:|.:.|::::|||||||:::|.||....:... ..||:|::|..:...|:|..:|.||||||
plant     6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLE-SKSTIGVEFATRTTQVEGKTIKAQIWDTA 69

  Fly   271 GQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSER 335
            ||||:|::|.||||.|...||:||:|.:.|:||:..||.|:|::|..::||::.|||:|.: ..|
plant    70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLN-HLR 133

  Fly   336 QVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQL 375
            .|..|||:.|..:..:.|:||||....|||.:|..:..::
plant   134 SVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEI 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 69/162 (43%)
RABA2cNP_190267.1 PLN03110 1..217 CDD:178657 71/170 (42%)

Return to query results.
Submit another query.