DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and RAB7B

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_188512.1 Gene:RAB7B / 821415 AraportID:AT3G18820 Length:206 Species:Arabidopsis thaliana


Alignment Length:203 Identity:79/203 - (38%)
Similarity:116/203 - (57%) Gaps:15/203 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 KVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQERFRSV 278
            |||:|||||||||||:.::.:.::...| .:|:|.||..|.|..:.....||||||||||||:|:
plant    10 KVIILGDSGVGKTSLMNQYVNKKFSNQY-KATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSL 73

  Fly   279 THAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQ----EDVVIVLIGNKADC-SGSERQVK 338
            ..|:||.|...:|:|||.:..:::|:..|..|....|.    |:...||||||.|. .|:.|.|.
plant    74 GVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLIGNKVDVDDGNSRVVS 138

  Fly   339 REDGER-LGREHNVPFMETSAKTGLNVELSFTAVARQ-LKSRGYEHGDDGKFNVHDFVRDNT--K 399
            .:..:. ...:.|:|:.|||||.|.|||.:|..:|:. |||     |::.:..:.|.:...|  :
plant   139 EKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKS-----GEEEELYLPDTIDVGTSNQ 198

  Fly   400 ARSVCAQC 407
            .||...:|
plant   199 QRSTGCEC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 78/201 (39%)
RAB7BNP_188512.1 Rab7 9..182 CDD:206655 74/177 (42%)

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