DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and rabl2b

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001072451.1 Gene:rabl2b / 779905 XenbaseID:XB-GENE-979695 Length:225 Species:Xenopus tropicalis


Alignment Length:204 Identity:70/204 - (34%)
Similarity:108/204 - (52%) Gaps:11/204 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 EEDEFDIMG--KVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIW 267
            ::|::|...  |:|.||||.|||:.|:.||....:.|.. |||..:........|||..|.:..|
 Frog    12 DQDKYDSAENVKIICLGDSAVGKSKLMERFLMDGFRPQQ-LSTFALTLYKYSTCVDGNTVLVDFW 75

  Fly   268 DTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSG 332
            ||||||||.|:..:||..|||.::::||..|.||.|:..|..|:|||..| :..:::.||.|   
 Frog    76 DTAGQERFHSMHASYYHKAHACIMVFDVQRKITYKNLGKWYQELREYRPE-IPCIVVANKID--- 136

  Fly   333 SERQVKREDGERLGREHNVPFMETSAKTGLNVELSF---TAVARQLKSRGYEHGDDGKFNVHDFV 394
            ::.:|.:: |...|::||:||...||..|.||...|   ..:|...|....:..|:....:.:|.
 Frog   137 ADIRVTQK-GFNFGKKHNLPFYFVSAADGTNVVKLFKDAIKLAVSYKQNSQDFLDEVMRELENFE 200

  Fly   395 RDNTKARSV 403
            .:..:|..:
 Frog   201 LEKQEAEDL 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 68/193 (35%)
rabl2bNP_001072451.1 RabL2 22..182 CDD:133324 64/165 (39%)

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