DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and RAB3B

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_002858.2 Gene:RAB3B / 5865 HGNCID:9778 Length:219 Species:Homo sapiens


Alignment Length:163 Identity:72/163 - (44%)
Similarity:108/163 - (66%) Gaps:2/163 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 EDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTA 270
            :..||.|.|::::|:|.|||||.|.|:.|..:.|: |:|||||||:.|.|.....||||||||||
Human    16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPA-FVSTVGIDFKVKTVYRHEKRVKLQIWDTA 79

  Fly   271 GQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSER 335
            ||||:|::|.||||.|...:|:||:||:.:::.::.|..:|:.|:.::..::|:|||.|.. .||
Human    80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDME-EER 143

  Fly   336 QVKREDGERLGREHNVPFMETSAKTGLNVELSF 368
            .|..|.|:.|..:....|.|.|||..::|..:|
Human   144 VVPTEKGQLLAEQLGFDFFEASAKENISVRQAF 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 69/155 (45%)
RAB3BNP_002858.2 Rab3 22..186 CDD:206657 70/157 (45%)
Switch 1. /evidence=ECO:0000269|PubMed:35871249, ECO:0007744|PDB:8A4B 45..58 6/13 (46%)
Switch 2. /evidence=ECO:0000269|PubMed:35871249, ECO:0007744|PDB:8A4B 78..96 12/17 (71%)

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