DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and rabl2

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_009291694.1 Gene:rabl2 / 561568 ZFINID:ZDB-GENE-060503-464 Length:232 Species:Danio rerio


Alignment Length:213 Identity:63/213 - (29%)
Similarity:101/213 - (47%) Gaps:22/213 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 DEFDI--MGKVIMLGDSGVGKT-------SLLIRFRDGRYVPSYF-----LSTVGIDFRNKVVVV 257
            |::|.  ..|:|.||||.|||:       .|.|.....|.:....     |||..:........:
Zfish    12 DKYDSDEQVKIICLGDSAVGKSKYASCVAKLFISIIVDRILTECISRPQQLSTYALTLYKYTTTI 76

  Fly   258 DGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIV 322
            :|..:.:..|||||||||||:..:||..:||.::::||..|.||.|:..|..|:|||..| :..:
Zfish    77 NGQTILVDFWDTAGQERFRSMHPSYYHKSHACVMVFDVQRKITYKNLTVWYKELREYRPE-IPCL 140

  Fly   323 LIGNKADCSGSERQVKREDGERLGREHNVPFMETSAKTGLNVELSF---TAVARQLKSRGYEHGD 384
            ::.||.|   ::.:|.:: .....::..:||...||..|.||...|   ..:|...|....:..|
Zfish   141 VVANKID---ADMKVTQK-SFNFAKKQGLPFYFVSAADGTNVVKVFKDAIQMALSYKRNSSDFMD 201

  Fly   385 DGKFNVHDFVRDNTKARS 402
            :....:.:|..:|.:..|
Zfish   202 EVMRELENFDLENKEESS 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 61/204 (30%)
rabl2XP_009291694.1 P-loop containing Nucleoside Triphosphate Hydrolases 20..193 CDD:476819 56/177 (32%)

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