DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and rab35

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_989019.1 Gene:rab35 / 394615 XenbaseID:XB-GENE-489018 Length:201 Species:Xenopus tropicalis


Alignment Length:207 Identity:80/207 - (38%)
Similarity:127/207 - (61%) Gaps:20/207 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 EFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQ 272
            ::|.:.|::::|||||||:|||:||.|..:..|| ::|:|:||:.:.|.::|.:|||||||||||
 Frog     4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSY-ITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67

  Fly   273 ERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQ- 336
            ||||::|..|||..|.::::||||:..::.|::.||.||.:.. :||..:|:|||.|  ..||: 
 Frog    68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKND--DPERKV 129

  Fly   337 VKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQL---------KSRGYEHGDDGKFNVHD 392
            |:.||..:...:.::...|||||..||||..|..:...:         |.:..:..|..|.:   
 Frog   130 VETEDAYKFAAQMDIQLFETSAKENLNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLS--- 191

  Fly   393 FVRDNTKARSVC 404
               .|:|.:..|
 Frog   192 ---KNSKRKKRC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 79/201 (39%)
rab35NP_989019.1 Rab35 3..201 CDD:133310 80/207 (39%)

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