DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and rab35l

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_989002.1 Gene:rab35l / 394598 XenbaseID:XB-GENE-5809894 Length:201 Species:Xenopus tropicalis


Alignment Length:168 Identity:77/168 - (45%)
Similarity:117/168 - (69%) Gaps:3/168 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 EFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQ 272
            ::|.:.|::::|||||||:|||:||.|..:..|| ::|:|:||:.:.:|:||.||||||||||||
 Frog     5 DYDHLFKLLLIGDSGVGKSSLLLRFSDNSFSGSY-ITTIGVDFKIRTLVLDGERVKLQIWDTAGQ 68

  Fly   273 ERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQV 337
            ||||::|..|||:.|.::::||||:..::.|::.||.||.:.. :.|..||:|||.| ..|.::|
 Frog    69 ERFRTITSTYYRNTHGVIVVYDVTSPESFVNVKRWLHEITQNC-DSVCTVLVGNKDD-DPSRKRV 131

  Fly   338 KREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQL 375
            :..|.:|...:..|...|||||...|||..|.:|.|.:
 Frog   132 EAADAKRFADQMGVRMFETSAKENRNVEEMFLSVTRMV 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 76/162 (47%)
rab35lNP_989002.1 P-loop containing Nucleoside Triphosphate Hydrolases 4..201 CDD:476819 77/168 (46%)

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