DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and Rab3

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster


Alignment Length:163 Identity:74/163 - (45%)
Similarity:111/163 - (68%) Gaps:2/163 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 EDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTA 270
            :..||.|.|::::|:|.|||||.|.|:.|..:. |.|:|||||||:.|.|.....||||||||||
  Fly    15 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFT-SAFVSTVGIDFKVKTVFRHDKRVKLQIWDTA 78

  Fly   271 GQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSER 335
            ||||:|::|.||||.|...:|:|||||:.::::::.|:.:|:.|:.::..::|:|||.|.. .:|
  Fly    79 GQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDME-DQR 142

  Fly   336 QVKREDGERLGREHNVPFMETSAKTGLNVELSF 368
            .:..|.|.:|..:..|.|.|||||..:||:..|
  Fly   143 VISFERGRQLADQLGVEFFETSAKENVNVKAVF 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 71/155 (46%)
Rab3NP_523687.1 Rab3 21..185 CDD:206657 72/157 (46%)

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