DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and Rab10

DIOPT Version :9

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster


Alignment Length:201 Identity:89/201 - (44%)
Similarity:136/201 - (67%) Gaps:5/201 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 FDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQE 273
            :|::.|::::||||||||.:|.||.|..:. |.|:||:||||:.|.|.:.|.::|||||||||||
  Fly     6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFT-STFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 69

  Fly   274 RFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVK 338
            ||.::|.:|||.|..::|:||:||:.:::||..||..|.|:|.|||..:::|||.|.: .:|.|.
  Fly    70 RFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMT-DKRVVN 133

  Fly   339 REDGERLGREHNVPFMETSAKTGLNVELSFTAVARQL--KSRGYEHGDDGKFNVHDFVRDNTKAR 401
            :|.||.:.|||.:.|||||||:.:|:|.:|..:|..:  |:.|.|..::.:..:.| .|:..||.
  Fly   134 KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERVIID-RRNQEKAP 197

  Fly   402 SVCAQC 407
            .....|
  Fly   198 GYSKCC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 87/194 (45%)
RAB 214..378 CDD:197555 81/165 (49%)
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 81/167 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454302
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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