DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab26 and Rab26

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_796349.1 Gene:Rab26 / 328778 MGIID:2443284 Length:260 Species:Mus musculus


Alignment Length:275 Identity:142/275 - (51%)
Similarity:183/275 - (66%) Gaps:51/275 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 GGGVSATA-------------VARP-PVAPAPVAP--GP--------GSEGASATLCKNAGRALI 194
            ||...||:             :|.| .|.|.|.||  ||        ||.|              
Mouse    11 GGSEPATSTLPAAAAATNGPRLAHPRTVRPGPEAPPNGPPQSIRPSLGSTG-------------- 61

  Fly   195 RMISSSKAPEEEDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDG 259
                        |.:|:..||:::||||||||.||:||:||.::...|:|||||||||||:.|||
Mouse    62 ------------DFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDG 114

  Fly   260 TRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLI 324
            .:|||||||||||||||||||||||||||||||||:|||.::|||:|||.||:||||:|||::|:
Mouse   115 MKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLL 179

  Fly   325 GNKADCSGSERQVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQLKSRGYEHGDDGKFN 389
            |||.| |..:|.|||||||:|.:|:.:|||||||:|||||:|:|||:|::||.|..:...:.:|.
Mouse   180 GNKVD-STQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPSEPRFR 243

  Fly   390 VHDFVRDNTKARSVC 404
            :||:|:...:..|.|
Mouse   244 LHDYVKREGRGVSCC 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 124/191 (65%)
Rab26NP_796349.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56 16/68 (24%)
Rab26 68..258 CDD:206695 122/189 (65%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 90..105 6/14 (43%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 123..140 16/16 (100%)

Return to query results.
Submit another query.