DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab26 and CG4789

DIOPT Version :9

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_573166.1 Gene:CG4789 / 32668 FlyBaseID:FBgn0030792 Length:274 Species:Drosophila melanogaster


Alignment Length:105 Identity:30/105 - (28%)
Similarity:56/105 - (53%) Gaps:10/105 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 KVIMLGDSGVGKTSL--LIRFRDGRYVPSYFLSTVGIDFRNKV-VVVDGTRVK----LQIWDTAG 271
            :::::||||||||||  ||...:....|.:   |||.:.:.|: ...:||..:    ::::|..|
  Fly     8 RIVVVGDSGVGKTSLTHLITHNEALIRPGW---TVGCNIQVKMHPFREGTARECPYFVELFDVGG 69

  Fly   272 QERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEI 311
            ....::....:|.....::|::|:||..:...:..||.||
  Fly    70 SLNHKNTRSVFYAGIDGIILVHDLTNAKSQRQLIDWLYEI 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 30/105 (29%)
RAB 214..378 CDD:197555 30/105 (29%)
CG4789NP_573166.1 P-loop_NTPase 7..228 CDD:304359 30/105 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454467
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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