DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and RabX2

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster


Alignment Length:174 Identity:72/174 - (41%)
Similarity:108/174 - (62%) Gaps:2/174 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 FDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQE 273
            ||.:.||::||||||||:.||:||.|.|:...| |.|:|||.:.:.|.:....:.||:|||:|.:
  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKY-LRTMGIDVKARSVELVSRVMMLQVWDTSGDK 67

  Fly   274 RFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVK 338
            ||.|:..:.||.||.:||:||:|:..::.||..|:.|||....:.|.::|:|||:| ..:.|||.
  Fly    68 RFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSD-DPNHRQVS 131

  Fly   339 REDGERLGREHNVPFMETSAKTGLNVELSFTAVARQLKSRGYEH 382
            .|.|........:.|.|.|||:|:||...|:::|..:..|...|
  Fly   132 MEQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLH 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 70/169 (41%)
RabX2NP_572627.1 Rab 8..165 CDD:206640 67/158 (42%)

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