DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and Rab6b

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_006511799.1 Gene:Rab6b / 270192 MGIID:107283 Length:234 Species:Mus musculus


Alignment Length:217 Identity:79/217 - (36%)
Similarity:121/217 - (55%) Gaps:31/217 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 ATAVARPPVAPAPVAPGPGSEGASATLCKNAGRALIRMISSSKAPEEEDEFDIMGKVIMLGDSGV 223
            |:..||..:..:.:|..||||..|:..|.:.        |.:|                     |
Mouse    15 ASLGARDALDASAMAATPGSEAFSSAPCSST--------SGAK---------------------V 50

  Fly   224 GKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHA 288
            |||||:.||....:..:| .:|:||||.:|.:.::...|:||:|||||||||||:..:|.||:..
Mouse    51 GKTSLITRFMYDSFDNTY-QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTV 114

  Fly   289 LLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGERLGREHNVPF 353
            .:::||:||..::.....|:.::|.....||:|:|:|||.|.: .:||:..|:||:..:|.:|.|
Mouse   115 AVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLA-DKRQITIEEGEQRAKELSVMF 178

  Fly   354 METSAKTGLNVELSFTAVARQL 375
            :|||||||.||:..|..||..|
Mouse   179 IETSAKTGYNVKQLFRRVASAL 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 67/162 (41%)
Rab6bXP_006511799.1 Rab6 50..200 CDD:206654 66/151 (44%)

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