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Protein Alignment Rab26 and spg1
DIOPT Version :9
Sequence 1: | NP_001097658.1 |
Gene: | Rab26 / 40359 |
FlyBaseID: | FBgn0086913 |
Length: | 410 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_593285.1 |
Gene: | spg1 / 2542761 |
PomBaseID: | SPAC1565.06c |
Length: | 198 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 167 |
Identity: | 50/167 - (29%) |
Similarity: | 84/167 - (50%) |
Gaps: | 16/167 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 214 KVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQERFRSV 278
||.|:|||.:|||||::.:..|.: ......|:|::|..|.:.:..|.:...|||..||..|.::
pombe 12 KVGMIGDSSIGKTSLMVTYVQGSF-DEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNM 75
Fly 279 THAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGE 343
......||.|:|.::|::.|:|.::|:.|..:.|.: .:..|.:|||.|.| ......|||.|
pombe 76 LPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGF-NKTAVPILIGTKYD---HFMTFPREDQE 136
Fly 344 RLGRE---------HNVPFMETSAKTGLNVELSFTAV 371
.:.:: .::.|..|| ..:||:..|..|
pombe 137 EITKQARRYAKAMKASLVFCSTS--HSINVQKIFKIV 171
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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