DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and Rab6a

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_077249.1 Gene:Rab6a / 19346 MGIID:894313 Length:208 Species:Mus musculus


Alignment Length:172 Identity:75/172 - (43%)
Similarity:110/172 - (63%) Gaps:4/172 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 KVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQERFRSV 278
            |::.||:..||||||:.||....:..:| .:|:||||.:|.:.::...|:||:|||||||||||:
Mouse    15 KLVFLGEQSVGKTSLITRFMYDSFDNTY-QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly   279 THAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGE 343
            ..:|.||:...:::||:||..::.....|:.::|.....||:|:|:|||.|.: .:|||..|:||
Mouse    79 IPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLA-DKRQVSIEEGE 142

  Fly   344 RLGREHNVPFMETSAKTGLNVELSFTAVARQLKSRGYEHGDD 385
            |..:|.||.|:|||||.|.||:..|..||..|.  |.|...|
Mouse   143 RKAKELNVMFIETSAKAGYNVKQLFRRVAAALP--GMESTQD 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 75/172 (44%)
Rab6aNP_077249.1 Rab6 14..174 CDD:206654 71/160 (44%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20340 32..50 6/18 (33%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20340 69..88 12/18 (67%)

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