DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and rab-37

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001041294.1 Gene:rab-37 / 180696 WormBaseID:WBGene00004285 Length:223 Species:Caenorhabditis elegans


Alignment Length:174 Identity:93/174 - (53%)
Similarity:129/174 - (74%) Gaps:5/174 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 KVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQERFRSV 278
            ||::||||..|||.||||::||.::.:.|:||||||:|||::.:...:|||||||||||||||||
 Worm    31 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSV 95

  Fly   279 THAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGE 343
            |.:|||||.||||:||:.|:.:::|.|.||.:|:||.:|.|.:.|:|||.|.   .|.|..::|:
 Worm    96 TTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL---PRAVPTDEGK 157

  Fly   344 RLGREHNVPFMETSAKTGLNVELSFTAVA-RQLKSR-GYEHGDD 385
            ||...:.:||||||||||.||:.:|..:| |.||.: |:..|.:
 Worm   158 RLAEAYQIPFMETSAKTGFNVDRAFLGLAERMLKLKYGFVPGGE 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 93/174 (53%)
rab-37NP_001041294.1 RAB 30..192 CDD:197555 90/163 (55%)

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