DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and RabX4

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_308884.2 Gene:RabX4 / 1270205 VectorBaseID:AGAMI1_005765 Length:219 Species:Anopheles gambiae


Alignment Length:195 Identity:88/195 - (45%)
Similarity:133/195 - (68%) Gaps:8/195 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 EFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQ 272
            :|....||::||||.||||.::.|:.|.||..:| :||:||||:.|::.:||..:||||||||||
Mosquito     4 DFAATYKVLVLGDSNVGKTCIVHRYCDERYYDTY-ISTIGIDFKQKLINLDGVPIKLQIWDTAGQ 67

  Fly   273 ERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQV 337
            ||||::|.||||.|..:||:||||:..:::|:..||..|:|.|..|||.||.|||.:|:..:|.|
Mosquito    68 ERFRTLTTAYYRGAMGILLMYDVTSLESFNNLSYWLRNIQENAAPDVVKVLAGNKCECNPPQRAV 132

  Fly   338 KREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQLKS----RGYEHGDDG--KFNVHDFVRD 396
            .:|.||::....::||.|.|.|..:|:|.:|..:||:::.    || |:.|||  :..:.|.:::
Mosquito   133 DKERGEKIAENFDMPFFEVSCKQNINIEDAFLTLARKIREQREHRG-ENFDDGDRQKGLQDMIKN 196

  Fly   397  396
            Mosquito   197  196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 87/189 (46%)
RabX4XP_308884.2 RAB 9..170 CDD:197555 80/161 (50%)

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