DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab26 and rab6b

DIOPT Version :10

Sequence 1:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001090835.1 Gene:rab6b / 100038231 XenbaseID:XB-GENE-493829 Length:208 Species:Xenopus tropicalis


Alignment Length:179 Identity:74/179 - (41%)
Similarity:112/179 - (62%) Gaps:4/179 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 KVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQERFRSV 278
            |::.||:..||||||:.||....:..:| .:|:||||.:|.:.::...|:||:|||||||||||:
 Frog    15 KLVFLGEQSVGKTSLITRFMYDSFDNTY-QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly   279 THAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGE 343
            ..:|.||:...:::||:||..::.....|:.::|.....||:|:|:|||.|.: .:||:..|.||
 Frog    79 IPSYIRDSTVAVVVYDITNLNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLA-DKRQITIEAGE 142

  Fly   344 RLGREHNVPFMETSAKTGLNVELSFTAVARQLKSR--GYEHGDDGKFNV 390
            :..:|.||.|:|||||||.||:..|..||..|...  ..|...||..::
 Frog   143 QKAKELNVMFIETSAKTGYNVKQLFRRVASALPGMECSEEKSKDGMIDI 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 74/179 (41%)
rab6bNP_001090835.1 Rab6 14..174 CDD:206654 70/160 (44%)

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