DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pc and TFL2

DIOPT Version :9

Sequence 1:NP_524199.1 Gene:Pc / 40358 FlyBaseID:FBgn0003042 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001330016.1 Gene:TFL2 / 831635 AraportID:AT5G17690 Length:452 Species:Arabidopsis thaliana


Alignment Length:435 Identity:82/435 - (18%)
Similarity:151/435 - (34%) Gaps:124/435 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GKGSKGKLGRDNATDDPVDLVYAAEKIIQKRVKKGVVEYRVKW-------KGWNQRYNTWEPEVN 62
            |:|..|:..|....:.    .|..|.|.:|||:||.|:|.:|.       :||.:..|||||..|
plant    91 GEGEGGQEERPKLDEG----FYEIEAIRRKRVRKGKVQYLIKCYKLGCERRGWPETANTWEPLEN 151

  Fly    63 ---ILDRRLIDIYEQTNKSSGTPSKRGIKKKEKEPDPEPESEEDEYTFTENDVDTHQATTSSATH 124
               |.|  :||.:|.:.|    |.|.|.|:|.|...|..:.::.:             ..:|.:|
plant   152 LQSIAD--VIDAFEGSLK----PGKPGRKRKRKYAGPHSQMKKKQ-------------RLTSTSH 197

  Fly   125 DKESKKEKKHHHHHHHHHHIKSERNSGRRSESPLTHHHHHHHHESKRQRIDHSSSS---NSSFTH 186
            |...|.:.            .:..|:....:.|              ..:|.|.||   ......
plant   198 DATEKSDS------------STSLNNSSLPDIP--------------DPLDLSGSSLLNRDVEAK 236

  Fly   187 NSFVP-EPDSNSSSSEDQPLIGTKRKAEVL-------------------------KESGKIGVTI 225
            |::|. :.::||.|      :|..|:..::                         .:.|.||   
plant   237 NAYVSNQVEANSGS------VGMARQVRLIDNEKEYDPTLNELRGPVNNSNGAGCSQGGGIG--- 292

  Fly   226 KTSPDGPTIKPQPTQQVTPSQQQPFQDQQQAEKIASEAATQLKSEQQATPLATEAINTTPAESGA 290
               .:|..::|....:|.|.:.........|::..|.:..:.|.:.     :|...:|.|.:...
plant   293 ---SEGDNVRPNGLLKVYPKELDKNSRFIGAKRRKSGSVKRFKQDG-----STSNNHTAPTDQNL 349

  Fly   291 EEEEVANEEGNQQAPQVPSENNNIPKPCNNLAINQKQPLTPLS-PRALPPRFWLPAKCNISNRVV 354
            ..:....:...    ::....|..|....|..::||..:..|. .:.|.|..:..:..:....|:
plant   350 TPDLTTLDSFG----RIARMGNEYPGVMENCNLSQKTKIEELDITKILKPMSFTASVSDNVQEVL 410

  Fly   355 ITDVTVNLETVTIRECKTERGF-----------FRERDMKGDSSP 388
            :|.:.:..:.   :|...:..|           |.|:.:|.:.:|
plant   411 VTFLALRSDG---KEALVDNRFLKAHNPHLLIEFYEQHLKYNRTP 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcNP_524199.1 CHROMO 25..77 CDD:214605 24/61 (39%)
TFL2NP_001330016.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000191
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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