Protein Alignment Pc and cbx8

DIOPT Version :10

• Sequence 1: NP_524199.1
• Gene: Pc / 40358
• FlyBaseID: FBgn0003042
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_001072443.1
• Gene: cbx8 / 779897
• XenbaseID: XB-GENE-977527
• Length: 362
• Species: Xenopus tropicalis
• Alignment Length: 406
• Identity: 105/406 - (25%)
• Similarity: 166/406 - (40%)
• Gaps: 104/406 - (25%)

  Fly    25 VYAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIYE--QTNKSSGTPSKRGI 87
            |:|||.::::|::||.:||.||||||:|:|:|||||.||||.||:..:|  :..:....|.|||
 Frog    10 VFAAESLLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENILDARLVAAFEDREREREMYGPKKRG- 73

  Fly    88 KKKEKEPDPEPESEEDEYTFTENDVDTHQATTSSATHD--KESKKEKKHHHHHHHHHHIKSERNS 150
                    |:|:      ||    :...||..::.|::  .||.:..:..:..|....:.|....
 Frog    74 --------PKPK------TF----LLKAQAKANAKTYEFRSESTRGVRIPYPGHPPQELPSRSRE 120

  Fly   151 GRRSESPLTHHHHHHHHESKRQRIDHSSSSNSSFTHNSFVPEPDSNSSSSEDQPL-IGTKRK--- 211
            |.||                   |..||..:|:...:.|...........|..|: |..|:|
 Frog   121 GLRS-------------------IPTSSQGSSATRGDIFSERLGRTEMRGEHYPMKIKRKKKHHS 166

  Fly   212 AEVLKESGKIGVTIKTSPDGPTIKPQPTQQVTPSQQQPFQDQQQAEKI-ASEAATQLKSEQQATP 275
            .:.|.|.|...:.|.|:     |.....:.||.|.:   .|...|.|. |..:..|| :.:|.|.
 Frog   167 DKGLCEVGNQAIRISTA-----ISSNQLETVTGSAR---TDNPSAGKYHAPHSVIQL-ARRQDTD 222

  Fly   276 LATEAINTTPAESGAEEEEVANEEGNQQAPQVPSEN------------------NNIPKPCNNLA 322
            |...: :..|  .....|....:.|.....|:.::|                  :::.:..|:|.
 Frog   223 LGPSS-HVGP--GFMHRERALTQTGQDIQEQLSTDNHPHRTKHRVDFMASVCKESSVSRSRNSLG 284

  Fly   323 INQ---------------------KQPLTPL--SPRALPPRFWLPAKCNISNRVVITDVTVNLET 364
            ..:                     :.|:..:  .|...|   |.|...|. .:||:||||.|..|
 Frog   285 YQEQISDFYRGALGTHGGKPSLIARIPVARILGEPEEEP---WRPPVENF-EKVVVTDVTSNFLT 345

  Fly   365 VTIRECKTERGFFRER 380
            |||:|..|::|||:|:
 Frog   346 VTIKESNTDQGFFKEK 361

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pc	NP_524199.1	CD_polycomb	23..76	CDD:349291	29/52 (56%)
		CBX7_C	341..373	CDD:465385	15/31 (48%)
cbx8	NP_001072443.1	CD_Cbx6	8..65	CDD:349295	29/54 (54%)
		CBX7_C	<332..354	CDD:465385	12/21 (57%)