DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pc and cbx7a

DIOPT Version :9

Sequence 1:NP_524199.1 Gene:Pc / 40358 FlyBaseID:FBgn0003042 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001017853.1 Gene:cbx7a / 550551 ZFINID:ZDB-GENE-050417-400 Length:393 Species:Danio rerio


Alignment Length:417 Identity:100/417 - (23%)
Similarity:158/417 - (37%) Gaps:100/417 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VYAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIYEQTNKSSGTPS--KRGI 87
            |:|.|.|.:||::||.|||.:||:||:.:|:|||||.||||.||:..:|:..:.....:  |:|:
Zfish    10 VFAVESITKKRIRKGNVEYLLKWQGWSPKYSTWEPEDNILDPRLVLAFEEKAEKDRALAYKKKGL 74

  Fly    88 KKKE---------------KEPD-PEPESEEDEYTFTENDVDTHQATTSSATHDKESKKEKKHHH 136
            :.::               |.|| |.|............:||.::.....:...:..|...|   
Zfish    75 RPRQVILRNIYPMDLRSAHKVPDKPSPRIRLSLTRSMSTEVDQNRRRYRDSVVYRRLKNRYK--- 136

  Fly   137 HHHHHHHIKSERNSG-RRSESPLTH------------HHHHHHHESKRQRIDHSSSS-------- 180
                :...:|....| :.|:.|:.|            :......:.|:.|.|..:::        
Zfish   137 ----NRQCRSRLFEGIKPSKQPMRHPLPAKDCTENAWNEDEQKRKVKKMRKDEENTTQVHQDIPS 197

  Fly   181 --------NSSFTHNSFVP-EPDSNSSS---SEDQPL--IGTKRKAEVLKESGKIGVTIKTSPDG 231
                    |||....|.:. :.|.|.||   .|::|.  .||...|   .||..|..|.|..|..
Zfish   198 GQEMSEGYNSSAEQESEITIKEDENCSSIFDQEEKPSEDTGTAIGA---PESSTITDTEKNEPVT 259

  Fly   232 PTIKPQPTQQVTPSQQQPFQDQQQAEKIASEAATQLKSEQQATPLATEAINTTPAESGAEEEEVA 296
            .|...:....|:.......|...:..|..:|.....:.:.:.:.:......|...|...|..||.
Zfish   260 NTAGDEDCVWVSHDTTNTDQSLHKCTKSGAEEGVFDRVQNRPSVIEVRLSATCGQEEVRESAEVG 324

  Fly   297 NEEGNQQAP---------QVPSENNNIPKPCNNLAINQKQPLTPLSPRALPPRFWLPAKCNISNR 352
            :.|...:..         |||              |:|.|  ||::....|            .:
Zfish   325 SSEAKDKEGIDAEVTAEFQVP--------------IDQLQ--TPVTTAVHP------------GK 361

  Fly   353 VVITDVTVNLETVTIRECKTERGFFRE 379
            |::|.||:|..|||.:|..|..|||.|
Zfish   362 VIVTQVTINSLTVTFKEAMTAEGFFSE 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcNP_524199.1 CHROMO 25..77 CDD:214605 28/51 (55%)
cbx7aNP_001017853.1 CHROMO 10..62 CDD:214605 28/51 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I9354
eggNOG 1 0.900 - - E1_KOG2748
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 1 1.000 - - FOG0000191
OrthoInspector 1 1.000 - - otm25567
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2447
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.900

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