DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pc and Cbx6

DIOPT Version :9

Sequence 1:NP_524199.1 Gene:Pc / 40358 FlyBaseID:FBgn0003042 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_083039.2 Gene:Cbx6 / 494448 MGIID:3512628 Length:414 Species:Mus musculus


Alignment Length:435 Identity:111/435 - (25%)
Similarity:154/435 - (35%) Gaps:139/435 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VYAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIYEQTNKSSGT--PSKRGI 87
            |:|||.||::|::||.:||.||||||..:|:|||||.||||.|||..:||..:....  |.|||.
Mouse    10 VFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERERELYGPKKRGP 74

  Fly    88 KKKEKEPDPEPESEEDEYTFTENDVDTHQATTSSATHDKESKKEKKHHHHHHHHHHIKSERNSGR 152
            |.|........::|....:      |.|.:...||     |....|.|.....|...|..|...|
Mouse    75 KPKTFLLKARAQAEALRIS------DVHFSVKPSA-----SASSPKLHSSAAVHRLKKDIRRCHR 128

  Fly   153 RSESPLTHHHHHHHHESKRQRIDHSSSSNSSFTHNSFVPEPDSNSSS----------SEDQPLIG 207
            .|..||                                |.||....|          ||...:|.
Mouse   129 MSRRPL--------------------------------PRPDPQGGSPGLRPPISPFSETVRIIN 161

  Fly   208 TKRKAEVLKESGKIGVTIKTSPDGP-----------TIKPQ-PTQQVTPSQQQPFQDQQQAEKIA 260
            .|.|....|.: :|.:.:|....||           ..:|: |::.....:.:.|.:        
Mouse   162 RKVKPREPKRN-RIILNLKVIDKGPGGGSTAQGTGALARPKVPSRNRVIGKSKKFSE-------- 217

  Fly   261 SEAATQLKSEQQAT---------PLATEA-------------INTTPA----------ESGAEEE 293
            |...||::..:..|         |||...             :..|||          .||....
Mouse   218 SMLRTQIRHMKFGTFALYKPPPAPLAPSTAGKADVASSGPGLLLATPAAAPFDAHSSSSSGCPSP 282

  Fly   294 EVANEEGNQQAPQVPSE--NNNIPK-----------PCNNLAINQKQP--------------LTP 331
            .:.:.:.:...|::..|  :.::|.           |....|..|:.|              |.|
Mouse   283 TLQSSDPDDAPPKLLPETLSRSVPNWRESEVLDLSIPPEAAATGQRVPPDVTGAADQALHTALEP 347

  Fly   332 LSPRALPPRF--WLPAKCNISNRVVITDVTVNLETVTIRE-CKTE 373
            ....:..|..  |.|.....|| ||:||||.||.||||:| |..|
Mouse   348 TGAGSSEPEAGDWRPEMSPCSN-VVVTDVTSNLLTVTIKEFCSPE 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcNP_524199.1 CHROMO 25..77 CDD:214605 32/51 (63%)
Cbx6NP_083039.2 CHROMO 10..62 CDD:214605 32/51 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..152 8/56 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..308 5/40 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..365 5/20 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I9385
eggNOG 1 0.900 - - E1_KOG2748
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 124 1.000 Inparanoid score I4687
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43469
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2447
SonicParanoid 1 1.000 - - X2049
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.860

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