Protein Alignment Pc and rhi

DIOPT Version :10

• Sequence 1: NP_524199.1
• Gene: Pc / 40358
• FlyBaseID: FBgn0003042
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_536794.1
• Gene: rhi / 44879
• FlyBaseID: FBgn0004400
• Length: 418
• Species: Drosophila melanogaster
• Alignment Length: 304
• Identity: 65/304 - (21%)
• Similarity: 110/304 - (36%)
• Gaps: 64/304 - (21%)

  Fly    15 DNATDDPVDLVYAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNILD-RRLIDIYE----- 73
            |...:|.|: .|..|||:.||...|..:..|||.|:....|||||..|:.: .:|:..:|
  Fly    14 DAPPNDHVE-EYVVEKILGKRFVNGRPQVLVKWSGFPNENNTWEPLENVGNCMKLVSDFESEVFR 77

  Fly    74 --------QTNKSSGTPSKRGIKKKEKEPDPEPESEEDEYTFTENDVDTHQATTSSATHDKESKK 130
                    ...||..:||..|....|..|....::::.     ...|........|..:.|:.|.
  Fly    78 LHRKAAAKSVGKSKSSPSSSGPLITENGPSSSKKTQQH-----SKSVQAKNTAGMSKMNQKKGKN 137

  Fly   131 EKKHHHHHHHHHHIKSERNSGRRSESPLTHHHHHHHHESKRQRIDHSSS----SNSSFTHNSFVP 191
            .||      ....||...|. .:::.|.|            .::...|:    .|.|.|..:.:.
  Fly   138 IKK------TAGKIKDIENY-PKTQMPST------------SQVSTDSTEVFDGNPSATTTNMIK 183

  Fly   192 EPDSNSSSSEDQPLIGTKRKAEVLKESGKIGVT-IKTSPDGPTI--------KPQPTQQVTP--- 244
            .|...|..|:...:..||.|        .:|.| :||.|....:        .|..::.|:|
  Fly   184 SPRIQSLFSDLNLIEPTKDK--------DVGDTSLKTPPKSRRLIEFPQREDAPLSSKHVSPMLI 240

  Fly   245 -SQQQPFQDQQQAEKIASEAATQLKSEQQATPLATEAINTTPAE 287
             .:.||.|.....:....|:::.:.....::..:.::|..|.:|
  Fly   241 RKESQPLQSSCTDDSDLGESSSSMSLPTVSSTSSEKSIKVTKSE 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pc	NP_524199.1	CD_polycomb	23..76	CDD:349291	19/66 (29%)
		CBX7_C	341..373	CDD:465385
rhi	NP_536794.1	CD_Rhino	23..73	CDD:349280	18/49 (37%)
		CSD	362..411	CDD:349275