Protein Alignment Pc and Cbx7

DIOPT Version :10

• Sequence 1: NP_524199.1
• Gene: Pc / 40358
• FlyBaseID: FBgn0003042
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: XP_006242082.1
• Gene: Cbx7 / 362962
• RGDID: 735027
• Length: 251
• Species: Rattus norvegicus
• Alignment Length: 369
• Identity: 91/369 - (24%)
• Similarity: 127/369 - (34%)
• Gaps: 138/369 - (37%)

  Fly    25 VYAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIYEQTNKSSGTPSKRGIKK 89
            |:|.|.|.:|||:||.|||.||||||..:|:|||||.:|||.||:..||:
  Rat    10 VFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEE--------------- 59

  Fly    90 KEKEPDPEPESEEDEYTFTENDVDTHQATTSSATHDKESKKEKKHHHHHHHHHHIKSERNSGRRS 154
                                                    ||:|             :|.||.|.
  Rat    60 ----------------------------------------KEEK-------------DRASGYRK 71

  Fly   155 ESPLTHHHHHHHHESKRQRIDHSSSSNSSFTHNSFVPE--------PDSNSSSSEDQPLIGTKRK 211
            ..|          :.||..:....|.:...:|.:...|        |..|.|     |....|..
  Rat    72 RGP----------KPKRLLLQRLYSMDLRSSHKAKGKEKLCFSLACPLGNGS-----PKGVVKAG 121

  Fly   212 AEVLKESGKIGVTIKTSPDGPTIKPQPTQQVTPSQQQPFQDQQQAEKIASEAATQLKSEQQATPL 276
            |..|.|.|.:|.|:..    |..||....:......:.|          ....:.|:|......|
  Rat   122 AAELVEKGPLGPTLPF----PLRKPHKAHKYLRLSHKKF----------PPCGSHLESHSHRREL 172

  Fly   277 ATEAINTTPAESGAEE--EEVANEEGNQQAPQVPSENNNIPKPCNNLAINQKQPLTPLSPRALPP 339
            :.:       ||.|.:  :...:.|..:|.|:..:|.:         ..|...|.||:.|
  Rat   173 SLQ-------ESAAPDVLQATGDWEPVEQPPEEEAEAD---------LTNGPPPWTPMLP----- 216

  Fly   340 RFWLPAKCNISNRVVITDVTVNLETVTIRECKTERGFFRERDMK 383
                      |:.|.:||:|.|..|||.||.:...||||:|..|
  Rat   217 ----------SSEVTVTDITANSVTVTFREAQAAEGFFRDRSGK 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pc	NP_524199.1	CD_polycomb	23..76	CDD:349291	31/50 (62%)
		CBX7_C	341..373	CDD:465385	11/31 (35%)
Cbx7	XP_006242082.1	CD_Cbx7	7..62	CDD:349293	32/106 (30%)
		CBX7_C	209..240	CDD:465385	15/45 (33%)