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Protein Alignment Pc and Cbx1
DIOPT Version :9
Sequence 1: | NP_524199.1 |
Gene: | Pc / 40358 |
FlyBaseID: | FBgn0003042 |
Length: | 390 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006247295.1 |
Gene: | Cbx1 / 360609 |
RGDID: | 1310714 |
Length: | 193 |
Species: | Rattus norvegicus |
Alignment Length: | 79 |
Identity: | 31/79 - (39%) |
Similarity: | 47/79 - (59%) |
Gaps: | 0/79 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 YAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIYEQTNKSSGTPSKRGIKKK 90
|..||::.:||.||.|||.:||||::...||||||.|:....||..:.|:.|::....|....|:
Rat 21 YVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSDGGKR 85
Fly 91 EKEPDPEPESEEDE 104
:.:.|.|.:.||.:
Rat 86 KADSDSEDKGEESK 99
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1628171at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000191 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.920 |
|
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