Protein Alignment Pc and Cbx8

DIOPT Version :9

• Sequence 1: NP_524199.1
• Gene: Pc / 40358
• FlyBaseID: FBgn0003042
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_001029250.1
• Gene: Cbx8 / 303731
• RGDID: 1565375
• Length: 366
• Species: Rattus norvegicus
• Alignment Length: 408
• Identity: 106/408 - (25%)
• Similarity: 168/408 - (41%)
• Gaps: 104/408 - (25%)

  Fly    25 VYAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIYEQTNKSSGT--PSKRGI 87
            |:|||.::::|::||.:||.||||||:|:|:|||||.||||.||:..:|:..:....  |.|||
  Rat    10 VFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFEEREREMELYGPKKRG- 73

  Fly    88 KKKEKEPDPEPESEEDEYTFTENDVDTHQATTSSATHDKESKKEKKHHHHHHHHHHIKSERNSGR 152
                    |:|:      ||    :...||...:.|::                  .:|:...|.
  Rat    74 --------PKPK------TF----LLKAQAKAKAKTYE------------------FRSDSTRGI 102

  Fly   153 RSESPLTHHHHHHHHESKRQRIDHSSSSNS-SFTHNSFVPEPDSNSSSSEDQPLIGTKRKAEVLK 216
            |...|            .|...|.:|:|.: ....|:.:|.|.|::|:....|.....|..:..:
  Rat   103 RIPYP------------GRSPQDLASTSRAREGLRNTGLPPPGSSTSTCRADPPRDRDRDRDRER 155

  Fly   217 ESGKIGVTIKTSPDGPTIK---PQPTQQVTPSQQQPFQDQQ-------QAEKI-----------A 260
            :.|...|..|.|..|.:.|   |:|.:::....|:|..:..       :..|:           |
  Rat   156 DRGTSRVDEKPSSPGDSSKKRGPKPRKELLDPSQRPLGEPSDGLGEYLKGRKLDETPSGIGKFSA 220

  Fly   261 SEAATQLKSEQQA--------TPLATE-----AINTTPAESGAEEEEVANEEGNQQAPQVPS--- 309
            ..:..||...|.:        :|.:.|     |.:|.||.  ..:...|..|...|....|.
  Rat   221 GHSVIQLARRQDSDLVQYGVTSPSSAEASGKLAADTFPAR--VIKHRAALLEAKGQGALDPGGTR 283

  Fly   310 --ENNNIPKPCNNL-----AINQKQPLTPLSPRAL-----PPRFWLPAKCNISNRVVITDVTVNL 362
              .::..|....:|     |...:..|....|.|.     ....|.|:..|: .:||:||||.|.
  Rat   284 VRHSSGTPGSVGSLYRDMGAQGGRPSLIARIPVARILGDPEEESWSPSLTNL-EKVVVTDVTSNF 347

  Fly   363 ETVTIRECKTERGFFRER 380
            .||||:|..|::|||:|:
  Rat   348 LTVTIKESNTDQGFFKEK 365

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pc	NP_524199.1	CHROMO	25..77	CDD:214605	29/51 (57%)
Cbx8	NP_001029250.1	CD_polycomb_like	11..59	CDD:349277	27/47 (57%)
		CBX7_C	326..358	CDD:407338	15/32 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	71	1.000	Domainoid score	I9195
eggNOG	1	0.900	-	-		E1_KOG2748
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	124	1.000	Inparanoid score	I4621
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1628171at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm45533
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR46389
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X2049
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	9.060