DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pc and cec-1

DIOPT Version :9

Sequence 1:NP_524199.1 Gene:Pc / 40358 FlyBaseID:FBgn0003042 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_498862.1 Gene:cec-1 / 176190 WormBaseID:WBGene00000414 Length:304 Species:Caenorhabditis elegans


Alignment Length:342 Identity:72/342 - (21%)
Similarity:126/342 - (36%) Gaps:113/342 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VYAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIY----------------- 72
            :|..|.|::.|.|||..|:.:||.|::..:|:|||:.||:|..||:.:                 
 Worm     7 LYTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAFFTREAARKAEIKAKKDK 71

  Fly    73 -------------EQTNKSSGTPSKRGIKKKEKEP--------------DPEPESEEDEYTFTEN 110
                         ...:|:|.:...||.|...|.|              |..|:|:.||      
 Worm    72 MAAGKKGASSKASASVSKASASTPARGAKAAPKPPPKKSPPKRQRLAGGDIRPDSDTDE------ 130

  Fly   111 DVDTHQATTSSATHDKESKKEKKHHHHHHHHHHIKSERNSGRRSESPLTHHHHHHHHESKRQRID 175
               .|    |||  ||:||.|               :.......|.|:         ..|::.:.
 Worm   131 ---EH----SSA--DKKSKAE---------------DEEEVEDDEEPV---------PKKKKEVQ 162

  Fly   176 HSSSSNSSFTHNSFVPEPDSNSS-SSEDQPLIGTKRKAEVLKESGKIGVTIKTSPDGPTIKPQPT 239
            .               ||:...| ..||:.   ..::.|.|||..|:....|...:...::.:..
 Worm   163 E---------------EPEEEESVEGEDEE---ESQEVEDLKEDEKMEEDEKEEEEDVQLESEKN 209

  Fly   240 QQVTPSQQQPFQDQQQAEKIASEAATQLKSEQQA---TPLATEAINT-TPAESGAEEEEVANEEG 300
            ::  ..:::..:::::.|:...|...||...::.   |.:...|:.| .|:|..:.|:.|. |.|
 Worm   210 EK--EEEEEKVEEKKEEEEEEEEEEIQLVIVEKTVIETTIVEPAVATPEPSEPSSSEKAVV-ENG 271

  Fly   301 NQQAPQVPSENNNIPKP 317
            :..|    :..|:..||
 Worm   272 SSSA----AAGNSASKP 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcNP_524199.1 CHROMO 25..77 CDD:214605 20/81 (25%)
cec-1NP_498862.1 CHROMO 8..59 CDD:214605 20/50 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2748
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I4045
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 1 1.000 - - FOG0000191
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2447
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.900

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