DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7632 and Ephx3

DIOPT Version :10

Sequence 1:NP_649302.1 Gene:CG7632 / 40357 FlyBaseID:FBgn0037071 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001102458.1 Gene:Ephx3 / 366836 RGDID:1307206 Length:415 Species:Rattus norvegicus


Alignment Length:297 Identity:55/297 - (18%)
Similarity:112/297 - (37%) Gaps:52/297 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SGKWYGPKHVRPIVGMHGWQDNAGTFDTLAPLLPSHLSFLSIDAPGHGLSSWLPPGTSYHSIDLV 111
            :|:..||.    ::.:||:.:|..::........||...:::|..|:..|. .|.....:::||:
  Rat   147 AGRGNGPL----MLFLHGFPENWFSWRYQLREFQSHFHVVAVDLRGYSPSD-APKDVDCYTVDLL 206

  Fly   112 LI-TRRLMEEYNWDKISILAHSMSSINGFVFSALFPDKVDLFVGLDVLKPPVRSARGIVDSLTER 175
            |. .:.::....:.|..:::|...:...:.||..||..||..:   |:..|..|.  ..:..|..
  Rat   207 LTDIKDIILGLGYSKCILVSHDWGAALAWDFSVYFPSLVDRMI---VVSGPPMSV--FQEYSTRH 266

  Fly   176 IESALK-----------LERRLKSGSEPPAYDWDQLVTRLHEGSNKSVSIDACKYLLQRNCKPST 229
            |....:           |..:|.|.|:      .|::..:.....|.:.          ...|..
  Rat   267 IGQLFRSNYIFLFQLPWLPEKLLSLSD------FQILKSIFTHHKKGIP----------RLSPCE 315

  Fly   230 HEPHKYYFSRDNRLKSSLFY--TLHQEVPMEMARRIKCPHLFIKALQAPYYERKEYFDEVLAELQ 292
            .|...|.||....|...:.|  .:.:..|:| .:.:..|.|.:      :.|:.....:.|.|..
  Rat   316 LEAFLYPFSHPGGLSGPINYYRNVFRNFPLE-PKELSKPTLLL------WGEKDFSLQQGLVEAI 373

  Fly   293 KNPL----FEYHEVEGT-HHVHLNEPEKVAPIINSFI 324
            ::..    .|.|.:.|: |.:..:.||::...:.:|:
  Rat   374 ESHFVPGRLESHILPGSGHWIPQSHPEEMHQYMWAFL 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7632NP_649302.1 MenH 57..326 CDD:440361 52/287 (18%)
Ephx3NP_001102458.1 MenH 134..413 CDD:440361 55/297 (19%)

Return to query results.
Submit another query.