DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr78Cb and Lcp4

DIOPT Version :9

Sequence 1:NP_001262144.1 Gene:Cpr78Cb / 40353 FlyBaseID:FBgn0037068 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster


Alignment Length:109 Identity:34/109 - (31%)
Similarity:54/109 - (49%) Gaps:4/109 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RLVRVRRIRRLVGASERDARITDFRVSPTDDEGVFKYAFKTSNGIDVQAAGSPLETI-GIYSYTS 84
            :::.|..:..||.|:| :..:.:. |:....:| |.......||....|.|.....| |::.:.|
  Fly     3 KILLVCALVALVAANE-NPEVKEL-VNDVQADG-FVSKLVLDNGSAASATGDVHGNIDGVFEWVS 64

  Fly    85 PEGVPIETRYIADELGFHVVGRHLPQPPPTPDYILRSLEYIRTH 128
            |||..:...|.|||.|:......||.|||.|:.||:::.||:.|
  Fly    65 PEGEHVRVSYKADENGYQPQSDLLPTPPPIPEAILKAIAYIQAH 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr78CbNP_001262144.1 Chitin_bind_4 55..101 CDD:278791 15/46 (33%)
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 14/40 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470164
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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