DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr78Cb and Lcp2

DIOPT Version :9

Sequence 1:NP_001262144.1 Gene:Cpr78Cb / 40353 FlyBaseID:FBgn0037068 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001260802.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster


Alignment Length:87 Identity:32/87 - (36%)
Similarity:52/87 - (59%) Gaps:5/87 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VSPTDD---EGVFKYAFKTSNGIDVQAAGSPLETI-GIYSYTSPEGVPIETRYIADELGFHVVGR 106
            :|.:||   :| |..:..|||||:..|:|.....| |.:.:.||||..:|.:|:|:|.|:...|.
  Fly    31 LSRSDDVRADG-FDSSLHTSNGIEQAASGDAHGNIHGNFGWISPEGEHVEVKYVANENGYQPSGA 94

  Fly   107 HLPQPPPTPDYILRSLEYIRTH 128
            .:|.|||.|:.|.|::.::.:|
  Fly    95 WIPTPPPIPEAIARAVAWLESH 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr78CbNP_001262144.1 Chitin_bind_4 55..101 CDD:278791 18/46 (39%)
Lcp2NP_001260802.1 Chitin_bind_4 42..89 CDD:278791 18/46 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470178
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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