DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr78Ca and Lcp4

DIOPT Version :9

Sequence 1:NP_649298.2 Gene:Cpr78Ca / 40352 FlyBaseID:FBgn0037067 Length:127 Species:Drosophila melanogaster
Sequence 2:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster


Alignment Length:68 Identity:29/68 - (42%)
Similarity:40/68 - (58%) Gaps:4/68 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 NGITTKGAGNENGAV-GVVQFVSPEGIPVTFSYVADANGYQPTGDHIPA---IPLHVIRQLEYIR 114
            ||......|:.:|.: ||.::|||||..|..||.||.|||||..|.:|.   ||..:::.:.||:
  Fly    42 NGSAASATGDVHGNIDGVFEWVSPEGEHVRVSYKADENGYQPQSDLLPTPPPIPEAILKAIAYIQ 106

  Fly   115 THP 117
            .||
  Fly   107 AHP 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr78CaNP_649298.2 Chitin_bind_4 46..92 CDD:278791 17/38 (45%)
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 17/38 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470214
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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