DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr78Ca and Lcp2

DIOPT Version :9

Sequence 1:NP_649298.2 Gene:Cpr78Ca / 40352 FlyBaseID:FBgn0037067 Length:127 Species:Drosophila melanogaster
Sequence 2:NP_001260802.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster


Alignment Length:80 Identity:30/80 - (37%)
Similarity:45/80 - (56%) Gaps:4/80 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 YSFEFQTTNGITTKGAGNENGAV-GVVQFVSPEGIPVTFSYVADANGYQPTGDHIPA---IPLHV 106
            :.....|:|||....:|:.:|.: |...::||||..|...|||:.|||||:|..||.   ||..:
  Fly    42 FDSSLHTSNGIEQAASGDAHGNIHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAI 106

  Fly   107 IRQLEYIRTHPPVDE 121
            .|.:.::.:|||..|
  Fly   107 ARAVAWLESHPPAPE 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr78CaNP_649298.2 Chitin_bind_4 46..92 CDD:278791 16/46 (35%)
Lcp2NP_001260802.1 Chitin_bind_4 42..89 CDD:278791 16/46 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470218
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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