DRSC/TRiP Functional Genomics Resources

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Protein Alignment pzg and ZNF28

DIOPT Version :9

Sequence 1:NP_001262143.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster
Sequence 2:NP_008900.3 Gene:ZNF28 / 7576 HGNCID:13073 Length:718 Species:Homo sapiens


Alignment Length:587 Identity:113/587 - (19%)
Similarity:200/587 - (34%) Gaps:141/587 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QQAVNDAESGGVGIGGLATRCYICDDRCEPQTSLTDMC---TTHTSTKFPNKLAQLVGEGFLVIV 124
            ::::|:|.|       ::|...||   |.|:|.:::..   :.|:|.....:...:..:.|..|.
Human   165 EKSINNASS-------VSTSQRIC---CRPKTHISNKYGNNSLHSSLLTQKRNVHMREKSFQCIE 219

  Fly   125 CGEDYVCS------RCTNL------VNYYDRLENDVERVKTNLISLLNKK-YAINEDMGQEGSPP 176
            .|:.:.||      :.|:|      .:.|.::.|....:..:..|.:::| |..||         
Human   220 SGKSFNCSSLLKKHQITHLEEKQCKCDVYGKVFNQKRYLACHRRSHIDEKPYKCNE--------- 275

  Fly   177 LKMQKMVGGSANRSLEES-PSADLLRPRKLLQGNPVGQSKIAPGTTQSSVQGTQTVQRKATKIYK 240
              ..|:.|.:.:..|.:: .:||  :|.:..:.:.|...|        |...|..:.....|.||
Human   276 --CGKIFGHNTSLFLHKALHTAD--KPYECEECDKVFSRK--------SHLETHKIIYTGGKPYK 328

  Fly   241 CTSCDYKTSDMRLFNTHYETCK-------QQTFQCKTCRKIFPHFGAMKQHMVRDHNTAMDNTCA 298
            |..||      :.|..:....|       ::.::|..|.|:|.....:.:|. |.|.......|.
Human   329 CKVCD------KAFTCNSYLAKHTIIHTGEKPYKCNECGKVFNRLSTLARHR-RLHTGEKPYECE 386

  Fly   299 MCHINFVNENSLRKHMETNHATNVLVTSTTTIPASAAPVAAAAAAAAAAANENL-------VGTS 356
            .|...|..::.|.:|..              |.....|........|.|.|..|       .|..
Human   387 ECEKVFSRKSHLERHKR--------------IHTGEKPYKCKVCDKAFAYNSYLAKHSIIHTGEK 437

  Fly   357 LYTCNHCQFKSTDKVVFDEHMRKHAAGKP--------------------------KPFKCRLCSQ 395
            .|.||.|......:.....|.|.|.|.||                          ||:||::|.:
Human   438 PYKCNECGKVFNQQSTLARHHRLHTAEKPYKCEECDKVFRCKSHLERHRRIHTGEKPYKCKVCDK 502

  Fly   396 RFETREAATVHAKQHQ-TNFFKCGTCSMTFPKREMLVKHFEVHQSPSASTVSPKQSVSQNLNTQK 459
            .|.:....|.|.:.|. ...:.|..|...|..:..|..|.::|     :...|.:.         
Human   503 AFRSDSCLTEHQRVHTGEKPYMCNECGKVFSTKANLACHHKLH-----TAEKPYKC--------- 553

  Fly   460 LLQETIDEALSDSLPASTAAVVATTESENNIRFFSCSICSLTFIQETYYNHHMETHRRDK--KAT 522
               |..::..|..........:.|.|..     :.|.:|...|.::::...|...|..:|  |..
Human   554 ---EECEKVFSRKSHMERHRRIHTGEKP-----YKCKVCDKAFRRDSHLAQHQRVHTGEKPYKCN 610

  Fly   523 SAGATALNSAATALLSD-EPGEATGKAGDESGEQNAEADIESLFEKLHSDKNESGEAPKPGSKGG 586
            ..|.|...:::..:... ..||...|. :|.|:..::........:||     |||.|...::.|
Human   611 ECGKTFRQTSSLIIHRRLHTGEKPYKC-NECGKTFSQMSSLVYHHRLH-----SGEKPYKCNECG 669

  Fly   587 EM 588
            ::
Human   670 KV 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pzgNP_001262143.1 C2H2 Zn finger 241..263 CDD:275371 5/28 (18%)
C2H2 Zn finger 268..289 CDD:275371 6/20 (30%)
C2H2 Zn finger 297..318 CDD:275371 5/20 (25%)
C2H2 Zn finger 360..380 CDD:275368 5/19 (26%)
zf-H2C2_2 373..399 CDD:290200 12/51 (24%)
zf-C2H2_8 375..443 CDD:292531 21/94 (22%)
C2H2 Zn finger 390..410 CDD:275368 5/19 (26%)
C2H2 Zn finger 417..437 CDD:275368 5/19 (26%)
ZNF28NP_008900.3 KRAB 8..>48 CDD:214630
KRAB 8..47 CDD:279668
COG5048 <143..373 CDD:227381 47/244 (19%)
C2H2 Zn finger 217..237 CDD:275368 4/19 (21%)
C2H2 Zn finger 245..265 CDD:275368 2/19 (11%)
COG5048 267..655 CDD:227381 85/452 (19%)
C2H2 Zn finger 273..293 CDD:275368 5/30 (17%)
C2H2 Zn finger 301..321 CDD:275368 4/27 (15%)
C2H2 Zn finger 329..349 CDD:275368 5/25 (20%)
zf-H2C2_2 341..366 CDD:290200 5/24 (21%)
C2H2 Zn finger 357..377 CDD:275368 6/20 (30%)
zf-H2C2_2 370..394 CDD:290200 6/24 (25%)
C2H2 Zn finger 385..405 CDD:275368 5/33 (15%)
zf-H2C2_2 397..422 CDD:290200 5/38 (13%)
C2H2 Zn finger 413..433 CDD:275368 4/19 (21%)
zf-H2C2_2 425..450 CDD:290200 6/24 (25%)
C2H2 Zn finger 441..461 CDD:275368 5/19 (26%)
C2H2 Zn finger 469..489 CDD:275368 0/19 (0%)
zf-H2C2_2 481..506 CDD:290200 6/24 (25%)
C2H2 Zn finger 497..517 CDD:275368 5/19 (26%)
zf-H2C2_2 510..534 CDD:290200 6/23 (26%)
C2H2 Zn finger 525..545 CDD:275368 5/19 (26%)
C2H2 Zn finger 553..573 CDD:275368 2/31 (6%)
zf-H2C2_2 565..590 CDD:290200 5/29 (17%)
C2H2 Zn finger 581..601 CDD:275368 4/19 (21%)
zf-H2C2_2 593..618 CDD:290200 6/24 (25%)
C2H2 Zn finger 609..629 CDD:275368 2/19 (11%)
zf-H2C2_2 621..646 CDD:290200 5/25 (20%)
C2H2 Zn finger 637..657 CDD:275368 2/20 (10%)
C2H2 Zn finger 665..685 CDD:275368 1/7 (14%)
zf-H2C2_2 677..702 CDD:290200
C2H2 Zn finger 693..713 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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