DRSC/TRiP Functional Genomics Resources

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Protein Alignment pzg and RBAK

DIOPT Version :9

Sequence 1:NP_001262143.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster
Sequence 2:NP_001191385.1 Gene:RBAK / 57786 HGNCID:17680 Length:714 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pzgNP_001262143.1 C2H2 Zn finger 241..263 CDD:275371
C2H2 Zn finger 268..289 CDD:275371
C2H2 Zn finger 297..318 CDD:275371
C2H2 Zn finger 360..380 CDD:275368
zf-H2C2_2 373..399 CDD:290200
zf-C2H2_8 375..443 CDD:292531
C2H2 Zn finger 390..410 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
RBAKNP_001191385.1 KRAB 8..68 CDD:214630
C2H2 Zn finger 165..199 CDD:275368
Required for interaction with RB1. /evidence=ECO:0000269|PubMed:10702291 171..260
C2H2 Zn finger 207..227 CDD:275368
C2H2 Zn finger 263..283 CDD:275368
C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 319..339 CDD:275368
COG5048 343..701 CDD:227381
C2H2 Zn finger 347..367 CDD:275368
C2H2 Zn finger 375..395 CDD:275368
C2H2 Zn finger 403..423 CDD:275368
Interaction with AR. /evidence=ECO:0000269|PubMed:14664718 417..714
C2H2 Zn finger 431..451 CDD:275368
C2H2 Zn finger 459..479 CDD:275368
C2H2 Zn finger 513..533 CDD:275368
C2H2 Zn finger 541..561 CDD:275368
C2H2 Zn finger 569..589 CDD:275368
C2H2 Zn finger 597..617 CDD:275368
C2H2 Zn finger 625..645 CDD:275368
C2H2 Zn finger 653..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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