DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pzg and Zfp462

DIOPT Version :9

Sequence 1:NP_001262143.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster
Sequence 2:XP_038966959.1 Gene:Zfp462 / 362522 RGDID:1562123 Length:2565 Species:Rattus norvegicus


Alignment Length:762 Identity:141/762 - (18%)
Similarity:244/762 - (32%) Gaps:251/762 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 DAESGGVGIGGLATRCYICDDRCEPQTSLTDMCTTHTSTKFPNKLAQLVGEGFLVIVCG-----E 127
            :.|.....|..|..||..|   .:...|..::...|.:......|.:    .|:::..|     .
  Rat  1831 EVEGEAQDIEWLPFRCIKC---FKLSFSTAELLCMHYTDHHSRDLKR----DFVILGSGPRFQNS 1888

  Fly   128 DYVCSRC----------TNLVNYY-DRLENDVERVKTNLISLLNKKYAIN--EDMGQ-------E 172
            .:.|..|          |:.:|.: :..:...:|.:.....|..:|||..  .|..|       |
  Rat  1889 TFQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQERPFGHLE 1953

  Fly   173 GSPPLKMQKMVGGSANRSLEESPSADLLRP-----RKLLQ------------------------- 207
            .:|.:|.:|:||......:|..|:   ||.     ||.:|                         
  Rat  1954 EAPKIKERKVVGYKCKFCVEVHPT---LRAICNHLRKHVQYGSVPAVSAAVKQEAEDPSHLFLDG 2015

  Fly   208 --------GNPVG-------------QSKIAPG--------TTQSSVQGTQTVQRKATKI----- 238
                    |..||             :.:..||        ....|:||.::.:|....:     
  Rat  2016 FEAARDASGTLVGRVDGGHCLLDGMLEDETRPGGYHCSQCDRVLMSMQGLRSHERSHLALAMFTR 2080

  Fly   239 ---YKCTSCDYKTSDMRLFNTHYET--CKQQTFQCKTCRKIFPHFGAMKQHMVRDHNTAMDNTCA 298
               |.|..|.:.::.....:.|.:|  ...:.|:||.|.....:...:|.|:::.|.......|:
  Rat  2081 EDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCS 2145

  Fly   299 MCH-----INFVNENSLRKH-------------METNHATNVLVTSTTTIPASAAPVAAAAA--- 342
            .|.     |:.:.|:||:.|             :.::||.:   :|....||.....:..::   
  Rat  2146 WCSFSTMTISQLKEHSLKVHGKALTLPRPRIVSLLSSHAHH---SSQKATPAEEVEDSNDSSYSE 2207

  Fly   343 ------------AAAAAANENLV------GTSLYT---------CNHCQFKSTDKVVFDEHMRKH 380
                        :||.|.|.:.|      ||:..|         |..|:|.|........|.|..
  Rat  2208 PPDVQQQLNHYQSAALARNNSRVSPVPPSGTAAGTEQKAEAVLHCEFCEFSSGYIQSIRRHYRDK 2272

  Fly   381 AAGKPKPFKCRLCSQRFETREAATVHAK-------QHQTNFFKCGTCSMTFPKREMLVKHFEVHQ 438
            ..|| |.|||:.||.....:.|.|:|.:       :......:|..|......:..::.|..:|:
  Rat  2273 HGGK-KLFKCKDCSFYTGFKSAFTMHVEAGHSAVPEEGPKDLRCPLCLYHTKYKRNMIDHIVLHR 2336

  Fly   439 SPSASTVSPKQSVSQNLNTQKLLQETI------------DEALSDSLPASTAAVVATTESENNIR 491
            .   ..|.|.:.....|:  |.||..:            ||:|...:           |..|.:|
  Rat  2337 E---ERVVPIEVCRSKLS--KYLQGVVFRCDKCTFTCSSDESLQQHI-----------EKHNELR 2385

  Fly   492 FFSCSICSLTFIQETYYNHHMETHRRDKKATSAGATALNSAATALLSDEPGEATGKAGDESGEQN 556
            .:.|.:|    ..||.:...::||.||:...|...                |..|:...:..||.
  Rat  2386 PYKCQLC----YYETKHTEELDTHLRDEHKVSRNF----------------ELVGRVNLDQLEQM 2430

  Fly   557 AEADIESLFEKLHSDKNESGEAPKPGSKGGEMVITSQEGSG------------------------ 597
            .|.     .|...||..:..:.....::..|::..|..|:|                        
  Rat  2431 KEK-----MESSSSDDEDKDDEMSSKTEDRELMRFSDRGAGVNTEKRFPCEFCGRAFSQGSEWER 2490

  Fly   598 -----GITFNITIPQPDGDQSQKDSPNTTAPVSVSIDMPNLDQAEDE 639
                 |:..:      |.||..:|..:|...|..|:.:|:::..||:
  Rat  2491 HVLRHGMALH------DTDQVSRDEIHTKEMVEDSMQLPSIEAKEDD 2531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pzgNP_001262143.1 C2H2 Zn finger 241..263 CDD:275371 4/23 (17%)
C2H2 Zn finger 268..289 CDD:275371 5/20 (25%)
C2H2 Zn finger 297..318 CDD:275371 7/38 (18%)
C2H2 Zn finger 360..380 CDD:275368 6/19 (32%)
zf-H2C2_2 373..399 CDD:290200 10/25 (40%)
zf-C2H2_8 375..443 CDD:292531 17/74 (23%)
C2H2 Zn finger 390..410 CDD:275368 6/26 (23%)
C2H2 Zn finger 417..437 CDD:275368 3/19 (16%)
Zfp462XP_038966959.1 C2H2 Zn finger 2052..2072 CDD:275368 4/19 (21%)
zf-H2C2_5 2084..2108 CDD:404746 5/23 (22%)
C2H2 Zn finger 2086..2106 CDD:275368 3/19 (16%)
C2H2 Zn finger 2115..2136 CDD:275368 5/20 (25%)
C2H2 Zn finger 2144..2165 CDD:275368 6/20 (30%)
C2H2 Zn finger 2315..2335 CDD:275368 3/19 (16%)
C2H2 Zn finger 2361..2381 CDD:275368 4/30 (13%)
C2H2 Zn finger 2389..2410 CDD:275368 8/24 (33%)
C2H2 Zn finger 2475..2495 CDD:275368 0/19 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.