DRSC/TRiP Functional Genomics Resources

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Protein Alignment pzg and CG8944

DIOPT Version :9

Sequence 1:NP_001262143.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster
Sequence 2:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster


Alignment Length:508 Identity:97/508 - (19%)
Similarity:152/508 - (29%) Gaps:160/508 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 IVCGEDYVCSRCTNLVNYYDRLENDVERVKTNLISL--------LNKKYAINEDMGQEGSPPLKM 179
            |...:|.:..:..||...|.|..|.:...|||:.:|        ||:.|:.|:.|..........
  Fly   300 ISLAKDAITRKWDNLRTVYKRECNRMALEKTNISTLWYFKELHFLNEVYSYNDKMSDAVVKETSY 364

  Fly   180 QKMVGGSANRSLEESPSADLLRPRKLLQ-----GNPVGQSK--IAPGTTQSSVQGTQTVQRKATK 237
            ::......|    ::.:|.||...|..|     .:|..:||  ...|..|.:::..|.:.....:
  Fly   365 RRRFSAIWN----DTSTAKLLSMVKRYQCFYNRFDPDYRSKERRGEGLHQMAIELQQLIDVTTIQ 425

  Fly   238 IYKCTS---CDYKTSDMRLFNT-----------------HYETCKQQTFQCKTCRKIFPHFGAMK 282
            |.|..|   .||....|...|:                 |:.......|:|..|.:|......:.
  Fly   426 ISKRISQLRFDYSKQKMERLNSERLGKKFIANYLYYDQMHFMDDDIPPFKCAHCPEIVQTLRELD 490

  Fly   283 QHM-----------------VRDHNT-AMDN--------------TCAMCHINFVN----ENSLR 311
            .||                 ::.||. ..||              .|.:|..:|..    :..||
  Fly   491 LHMLTHQPSLGGGYYCNICSIQFHNAQEFDNHKQLHLGGVTEIKFNCELCTASFREKANYDEHLR 555

  Fly   312 KHME--------TNHATNVLVTSTTTIPASAAPVAAAAAAA----AAAANENLV----------- 353
            :|.|        .||:..........|.........:.:..    ||.|.:::|           
  Fly   556 RHNEELFLPSLALNHSIMEGGLGDDEIGVEGEESRGSGSRRKRRHAAKATDDMVDDDDRIGGGGG 620

  Fly   354 ------GTSL---YTCNHCQFKSTDKVVFDEHMRKHAAGKPKPFKCRL--CSQRFETREAATVHA 407
                  ||.:   |.|:.|:.........:.|...|...:.:.:||..  |::.|..|.:...|.
  Fly   621 GGSGGGGTDIAKPYGCDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHL 685

  Fly   408 KQHQTN-FFKCGTCSMTFPKREMLVKHFEVHQSPSASTVSPKQSVSQNLNTQKLLQETIDEALSD 471
            |||.:| .|||..|..||...:.|..|.::|                                  
  Fly   686 KQHYSNEEFKCDICGKTFKSTKNLQNHKQIH---------------------------------- 716

  Fly   472 SLPASTAAVVATTESENNIRFFSCSICSLTFIQETYYNHHMETHRRDKKATSA 524
                            :.|:.:.|.||...|.|......|...|.|...|..|
  Fly   717 ----------------DKIKRYVCQICGSAFAQAAGLYLHKRRHNRPNGAVGA 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pzgNP_001262143.1 C2H2 Zn finger 241..263 CDD:275371 6/41 (15%)
C2H2 Zn finger 268..289 CDD:275371 5/37 (14%)
C2H2 Zn finger 297..318 CDD:275371 7/32 (22%)
C2H2 Zn finger 360..380 CDD:275368 3/19 (16%)
zf-H2C2_2 373..399 CDD:290200 6/27 (22%)
zf-C2H2_8 375..443 CDD:292531 21/70 (30%)
C2H2 Zn finger 390..410 CDD:275368 6/21 (29%)
C2H2 Zn finger 417..437 CDD:275368 6/19 (32%)
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:287510 11/43 (26%)
MADF 379..472 CDD:214738 18/92 (20%)
C2H2 Zn finger 476..496 CDD:275368 5/19 (26%)
C2H2 Zn finger 506..526 CDD:275368 4/19 (21%)
C2H2 Zn finger 537..557 CDD:275368 5/19 (26%)
C2H2 Zn finger 636..656 CDD:275368 3/19 (16%)
zf-C2H2_8 639..712 CDD:292531 20/72 (28%)
C2H2 Zn finger 666..688 CDD:275368 6/21 (29%)
zf-C2H2 694..716 CDD:278523 8/21 (38%)
C2H2 Zn finger 696..716 CDD:275368 6/19 (32%)
zf-H2C2_2 708..733 CDD:290200 8/74 (11%)
C2H2 Zn finger 724..744 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455459
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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