DRSC/TRiP Functional Genomics Resources

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Protein Alignment pzg and Zfp40

DIOPT Version :9

Sequence 1:NP_001262143.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster
Sequence 2:NP_001344626.1 Gene:Zfp40 / 22700 MGIID:99185 Length:796 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pzgNP_001262143.1 C2H2 Zn finger 241..263 CDD:275371
C2H2 Zn finger 268..289 CDD:275371
C2H2 Zn finger 297..318 CDD:275371
C2H2 Zn finger 360..380 CDD:275368
zf-H2C2_2 373..399 CDD:290200
zf-C2H2_8 375..443 CDD:292531
C2H2 Zn finger 390..410 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
Zfp40NP_001344626.1 KRAB 42..82 CDD:307490
C2H2 Zn finger 227..247 CDD:275368
C2H2 Zn finger 255..275 CDD:275368
COG5048 279..677 CDD:227381
C2H2 Zn finger 283..302 CDD:275368
C2H2 Zn finger 310..330 CDD:275368
C2H2 Zn finger 338..358 CDD:275368
C2H2 Zn finger 365..385 CDD:275368
C2H2 Zn finger 393..413 CDD:275368
C2H2 Zn finger 421..441 CDD:275368
C2H2 Zn finger 449..469 CDD:275368
C2H2 Zn finger 477..497 CDD:275368
C2H2 Zn finger 505..525 CDD:275368
C2H2 Zn finger 533..553 CDD:275368
C2H2 Zn finger 561..581 CDD:275368
C2H2 Zn finger 589..609 CDD:275368
C2H2 Zn finger 618..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 672..692 CDD:275368
zf-H2C2_2 684..709 CDD:316026
C2H2 Zn finger 700..720 CDD:275368
C2H2 Zn finger 728..748 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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