DRSC/TRiP Functional Genomics Resources

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Protein Alignment pzg and row-1

DIOPT Version :9

Sequence 1:NP_001262143.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster
Sequence 2:NP_001122473.1 Gene:row-1 / 172928 WormBaseID:WBGene00009508 Length:584 Species:Caenorhabditis elegans


Alignment Length:399 Identity:82/399 - (20%)
Similarity:137/399 - (34%) Gaps:123/399 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 VQRKATKIYKCTSCDYKTSDMRLF--NTHYETCKQQTFQCKTCRKIF-----PHFGAMKQHMVRD 288
            :::|.:|.....||..:.||....  |:.....:.||  |:.|..:|     .....:|.||.:|
 Worm   207 IEKKESKDDGMFSCLLRNSDAAQLAENSALSLKRLQT--CQFCNAVFRTVHLKTIHVVKCHMEQD 269

  Fly   289 HNTAMDNTCAMCHINFVNENSLRKHMETNHATNVLVTSTTTIPASAAPVAAAAAAAAAAANENLV 353
            |   :|.||.:|.::|.|..:|..||:                                  :::.
 Worm   270 H---LDTTCNICELDFGNSIALNTHMK----------------------------------KHIS 297

  Fly   354 GTSLYTCNHCQFKSTDKVVFDEHMRKHAAGKPKPFKCRLC------------SQRFETREAATVH 406
            |.:.|.|..|:::::.:..|.:|..:..:...:...|.:|            |:....||... |
 Worm   298 GEAPYNCQKCKYRTSVRAFFYQHFIEKHSNDSRTLLCPICLHHEDLRPNVRRSKHIFVREFVN-H 361

  Fly   407 AKQHQTN-FFKCGTCSMTFPKREMLVKHFEVHQSPSASTVSPKQSVSQNLNTQKLLQETIDEALS 470
            .:.|... ..:|..|::||..|.:|    |.|::...:.::....|.:    :|.:.||..|.:|
 Worm   362 MRSHALGPQMRCHVCALTFTSRLLL----EAHRTNDHTMLNSLWQVIE----RKSVHETEREHMS 418

  Fly   471 DSLPASTAAVVATTESENNI-----RFFSCSICSLTFIQETYYNHHMETHRRDKKATSAGATALN 530
                           ..|.|     |||           ||     :|..|.:.:...||.....
 Worm   419 ---------------KRNKIGLLQRRFF-----------ET-----LEGRRINDEVACAGDKERE 452

  Fly   531 SAATALLSDEPGEATGKAGDESGEQNAEA-----------DIESLFE--KLHSDKNESGEA---- 578
            ........|...|.  :.|.:|...|..|           |||...|  :|.||..|..|.    
 Worm   453 GFDLTTTGDTLFEC--ECGFKSWNGNRTASHYHKCRRSINDIERKREIVRLGSDPKEELELFAVY 515

  Fly   579 PKPGSKGGE 587
            |:|.:...|
 Worm   516 PQPTNTEAE 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pzgNP_001262143.1 C2H2 Zn finger 241..263 CDD:275371 5/23 (22%)
C2H2 Zn finger 268..289 CDD:275371 6/25 (24%)
C2H2 Zn finger 297..318 CDD:275371 7/20 (35%)
C2H2 Zn finger 360..380 CDD:275368 4/19 (21%)
zf-H2C2_2 373..399 CDD:290200 5/37 (14%)
zf-C2H2_8 375..443 CDD:292531 16/80 (20%)
C2H2 Zn finger 390..410 CDD:275368 6/31 (19%)
C2H2 Zn finger 417..437 CDD:275368 7/19 (37%)
row-1NP_001122473.1 GAT1 <15..288 CDD:227928 23/85 (27%)
C2H2 Zn finger 244..265 CDD:275368 4/20 (20%)
C2H2 Zn finger 275..295 CDD:275368 7/53 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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