DRSC/TRiP Functional Genomics Resources

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Protein Alignment pzg and LOC108648854

DIOPT Version :9

Sequence 1:NP_001262143.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster
Sequence 2:XP_017952887.2 Gene:LOC108648854 / 108648854 -ID:- Length:530 Species:Xenopus tropicalis


Alignment Length:445 Identity:95/445 - (21%)
Similarity:149/445 - (33%) Gaps:99/445 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 EDYVCSRCTNLVNYYDRLENDVERVKTNLISLLNKKYAINEDMGQEGSPPLKMQKMVGGSANRSL 191
            ||||     ::|            ||..|.|....::..::..|.:.|..:          .|||
 Frog    11 EDYV-----SVV------------VKAELASSEGDRHFEDQIQGIDKSTVM----------GRSL 48

  Fly   192 EESPSADLL---RPRKLLQGNPVGQS----KIAPGTTQSSVQGTQTVQRKATKIYKCTSCDYKTS 249
            :.|.:..:.   .|..::..:||..|    :.|..:...|...|.|:..|    |.|..|....:
 Frog    49 DNSTTEQIQGTDTPTPIMGRSPVKTSNKYDENADTSPDKSGIATNTLCNK----YSCNECHKHFT 109

  Fly   250 DMRLFNTHYETCKQ-QTFQCKTCRKIFPHFGAMKQHMVRDHNTAMDNTCAMCHINFVNENSLRKH 313
            |.|.|..|....|: :.|.|..|.|.||....:.:|. |.|.......|..|...|..::.|:||
 Frog   110 DRRKFGKHQGMHKRGKPFSCSECGKCFPCRWNLDRHH-RTHTGEKPFLCTECGKCFSCQSDLKKH 173

  Fly   314 METNHATNVLVTSTTTIPASAAPVAAAAAAAAAAANENL-------VGTSLYTCNHCQFKSTDKV 371
            ..|:              ....|.:.:....:.:...:|       .|...::|:.|........
 Frog   174 YRTH--------------TGEKPYSCSECGRSFSYQSHLKEHYRTHTGEKPFSCSECGKCFASLY 224

  Fly   372 VFDEHMRKHAAGKPKPFKCRLCSQRFETREAATVHAKQH-------------------------- 410
            :.:.|.|:...|: |||.|..|.:.|......|||.|.|                          
 Frog   225 ILNVHQRRTHTGE-KPFCCSECGESFAASSELTVHRKTHTGEKPYSCSECGKCFSFRSHLYNHRR 288

  Fly   411 ---QTNFFKCGTCSMTFPKREMLVKHFEVH--QSPSASTVSPK-QSVSQNLNTQKLLQETIDEAL 469
               :...|.|..|...||.:..|.:|:..|  :.|.|.:...| .::..|||.......:.::..
 Frog   289 THTKEKPFSCSECGKCFPYQSCLKEHYRTHTGEKPFACSDCGKCFAMLYNLNVHHRRTHSGEKPF 353

  Fly   470 S-----DSLPASTAAVVATTESENNIRFFSCSICSLTFIQETYYNHHMETHRRDK 519
            |     .|...|:........:....:.||||||...|...:....|..||...|
 Frog   354 SCSDCEKSFATSSDLTSHRRRTHTGEKPFSCSICGKCFAFSSELTVHGRTHTGKK 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pzgNP_001262143.1 C2H2 Zn finger 241..263 CDD:275371 6/21 (29%)
C2H2 Zn finger 268..289 CDD:275371 7/20 (35%)
C2H2 Zn finger 297..318 CDD:275371 7/20 (35%)
C2H2 Zn finger 360..380 CDD:275368 4/19 (21%)
zf-H2C2_2 373..399 CDD:290200 9/25 (36%)
zf-C2H2_8 375..443 CDD:292531 23/98 (23%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 417..437 CDD:275368 6/19 (32%)
LOC108648854XP_017952887.2 C2H2 Zn finger 101..121 CDD:275368 6/19 (32%)
COG5048 125..510 CDD:227381 63/300 (21%)
C2H2 Zn finger 129..149 CDD:275368 7/20 (35%)
C2H2 Zn finger 157..177 CDD:275368 6/19 (32%)
C2H2 Zn finger 185..205 CDD:275368 1/19 (5%)
C2H2 Zn finger 213..234 CDD:275368 4/20 (20%)
C2H2 Zn finger 242..262 CDD:275368 7/19 (37%)
C2H2 Zn finger 270..290 CDD:275368 0/19 (0%)
C2H2 Zn finger 298..318 CDD:275368 6/19 (32%)
C2H2 Zn finger 326..347 CDD:275368 4/20 (20%)
C2H2 Zn finger 355..376 CDD:275368 2/20 (10%)
C2H2 Zn finger 384..404 CDD:275368 6/19 (32%)
C2H2 Zn finger 412..432 CDD:275368
C2H2 Zn finger 440..460 CDD:275368
C2H2 Zn finger 477..497 CDD:275368
C2H2 Zn finger 505..525 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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