Sequence 1: | XP_016874792.1 | Gene: | LRP1 / 4035 | HGNCID: | 6692 | Length: | 4561 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008763615.1 | Gene: | Lrp1 / 299858 | RGDID: | 1307535 | Length: | 4562 | Species: | Rattus norvegicus |
Alignment Length: | 4562 | Identity: | 4467/4562 - (97%) |
---|---|---|---|
Similarity: | 4509/4562 - (98%) | Gaps: | 1/4562 - (0%) |
- Green bases have known domain annotations that are detailed below.
Human 1 MLTPPLLLLLPLLSALVA-AAIDAPKTCSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEIC 64
Human 65 PQSKAQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLD 129
Human 130 GPTCYCNSSFQLQADGKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEP 194
Human 195 VDRPPVLLIANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCA 259
Human 260 RMPGLKGFVDEHTINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYN 324
Human 325 PKGIALDPAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLD 389
Human 390 YIEVVDYEGKGRQTIIQGILIEHLYGLTVFENYLYATNSDNANAQQKTSVIRVNRFNSTEYQVVT 454
Human 455 RVDKGGALHIYHQRRQPRVRSHACENDQYGKPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSC 519
Human 520 KKPEHELFLVYGKGRPGIIRGMDMGAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIG 584
Human 585 RQKIDGTERETILKDGIHNVEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTH 649
Human 650 PRAIVVDPLNGWMYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLY 714
Human 715 WVDAFYDRIETILLNGTDRKIVYEGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGVGGAPPTV 779
Human 780 TLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADGVTCLA 844
Human 845 NPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCENNRCIP 909
Human 910 NRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYP 974
Human 975 TCFPLTQFTCNNGRCININWRCDNEKDCGDGSDEQTCPEPADNDCGDNSDEAGCSHSCSSTQFKC 1039
Human 1040 NSGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTD 1104
Human 1105 CMDSSDEKSCEGVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCEDNSDEENCESLACRPPSHPC 1169
Human 1170 ANNTSVCLPPDKLCDGNDDCGDGSDEGELCDQCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGPD 1234
Human 1235 NHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNRHEIRRI 1299
Human 1300 DLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFEVVIQYGLATPE 1364
Human 1365 GLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDPRDGILFWTDWDASLPR 1429
Human 1430 IEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAIYSARYDGSGHMEVLRGHEF 1494
Human 1495 LSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTNTQPFDLQVYHPSRQPMAPNPCEA 1559
Human 1560 NGGQGPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFKKFLLYARQMEIRGVDLDAPYYNYII 1624
Human 1625 SFTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNL 1689
Human 1690 FWTSYDTNKKQINVARLDGSFKNAVVQGLEQPHGLVVHPLRGKLYWTDGDNISMANMDGSNRTLL 1754
Human 1755 FSGQKGPVGLAIDFPESKLYWISSGNHTINRCNLDGSGLEVIDAMRSQLGKATALAIMGDKLWWA 1819
Human 1820 DQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQLDHKGTNPCSVNNGDCSQLCLPTSET 1884
Human 1885 TRSCMCTAGYSLRSGQQACEGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAE 1949
Human 1950 NDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWTDQGFDVIEVARLNGS 2014
Human 2015 FRYVVISQGLDKPRAITVHPEKGYLFWTEWGQYPRIERSRLDGTERVVLVNVSISWPNGISVDYQ 2079
Human 2080 DGKLYWCDARTDKIERIDLETGENREVVLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDN 2144
Human 2145 ATDSVPLRTGIGVQLKDIKVFNRDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGA 2209
Human 2210 SCREYAGYLLYSERTILKSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAGTSPGTPNRIFF 2274
Human 2275 SDIHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGAFER 2339
Human 2340 ETVITMSGDDHPRAFVLDECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHR 2404
Human 2405 AEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKHVGSN 2469
Human 2470 MKLLRVDIPQQPMGIIAVANDTNSCELSPCRINNGGCQDLCLLTHQGHVNCSCRGGRILQDDLTC 2534
Human 2535 RAVNSSCRAQDEFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCSNGRCVSNM 2599
Human 2600 LWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDCEDASDEMNCSATDCSSY 2664
Human 2665 FRLGVKGVLFQPCERTSLCYAPSWVCDGANDCGDYSDERDCPGVKRPRCPLNYFACPSGRCIPMS 2729
Human 2730 WTCDKEDDCEHGEDETHCNKFCSEAQFECQNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPS 2794
Human 2795 SFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTCDDREFMCQNRQCIPKHFVCDHDRD 2859
Human 2860 CADGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCHDQSDEAPKNPHCTSQEHKCNAS 2924
Human 2925 SQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFR 2989
Human 2990 LKDDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFANRY 3054
Human 3055 YLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQVLHRTGLS 3119
Human 3120 NPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDVQNGYLYWTDWGDH 3184
Human 3185 SLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVVLSQDIP 3249
Human 3250 HIFALTLFEDYVYWTDWETKSINRAHKTTGTNKTLLISTLHRPMDLHVFHALRQPDVPNHPCKVN 3314
Human 3315 NGGCSNLCLLSPGGGHKCACPTNFYLGSDGRTCVSNCTASQFVCKNDKCIPFWWKCDTEDDCGDH 3379
Human 3380 SDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNRCI 3444
Human 3445 PGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQM 3509
Human 3510 TCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCVPGRWQCDY 3574
Human 3575 DNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKS 3639
Human 3640 GHCIPLRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDENP 3704
Human 3705 EECARFVCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAHTTHCKDKKEFLCRNQ 3769
Human 3770 RCLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGFHTVP 3834
Human 3835 GQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEIRSLF 3899
Human 3900 PGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTSNRHRRQIDR 3964
Human 3965 GVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGENRKTLISGMIDEPHAIVVDPLR 4029
Human 4030 GTMYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4094
Human 4095 DPIVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIHKFGHSPLVNLTGGLSHASDVVLYHQH 4159
Human 4160 KQPEVTNPCDRKKCEWLCLLSPSGPVCTCPNGKRLDNGTCVPVPSPTPPPDAPRPGTCNLQCFNG 4224
Human 4225 GSCFLNARRQPKCRCQPRYTGDKCELDQCWEHCRNGGTCAASPSGMPTCRCPTGFTGPKCTQQVC 4289
Human 4290 AGYCANNSTCTVNQGNQPQCRCLPGFLGDRCQYRQCSGYCENFGTCQMAADGSRQCRCTAYFEGS 4354
Human 4355 RCEVNKCSRCLEGACVVNKQSGDVTCNCTDGRVAPSCLTCVGHCSNGGSCTMNSKMMPECQCPPH 4419
Human 4420 MTGPRCEEHVFSQQQPGHIASILIPLLLLLLLVLVAGVVFWYKRRVQGAKGFQHQRMTNGAMNVE 4484
Human 4485 IGNPTYKMYEGGEPDDVGGLLDADFALDPDKPTNFTNPVYATLYMGGHGSRHSLASTDEKRELLG 4549
Human 4550 RGPEDEIGDPLA 4561 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | XP_016874792.1 | None | |||
Lrp1 | XP_008763615.1 | LDLa | 27..60 | CDD:197566 | 32/32 (100%) |
LDLa | 72..105 | CDD:197566 | 29/32 (91%) | ||
FXa_inhibition | 120..149 | CDD:291342 | 25/28 (89%) | ||
FXa_inhibition | 161..189 | CDD:291342 | 26/27 (96%) | ||
LY | 276..315 | CDD:214531 | 38/38 (100%) | ||
LY | 317..359 | CDD:214531 | 41/41 (100%) | ||
LY | 362..402 | CDD:214531 | 39/39 (100%) | ||
FXa_inhibition | 487..520 | CDD:291342 | 32/32 (100%) | ||
LY | 552..594 | CDD:214531 | 41/41 (100%) | ||
LY | 595..634 | CDD:214531 | 38/38 (100%) | ||
LY | 641..690 | CDD:214531 | 48/48 (100%) | ||
LY | <701..734 | CDD:214531 | 32/32 (100%) | ||
FXa_inhibition | 808..843 | CDD:291342 | 34/34 (100%) | ||
LDLa | 854..886 | CDD:197566 | 30/31 (97%) | ||
LDLa | 896..929 | CDD:238060 | 32/32 (100%) | ||
LDLa | 936..968 | CDD:197566 | 31/31 (100%) | ||
LDLa | 979..1012 | CDD:238060 | 31/32 (97%) | ||
LDLa | 1033..1066 | CDD:238060 | 32/32 (100%) | ||
LDLa | 1080..1115 | CDD:238060 | 33/34 (97%) | ||
LDLa | 1122..1158 | CDD:238060 | 33/35 (94%) | ||
LDLa | 1163..1196 | CDD:238060 | 30/32 (94%) | ||
FXa_inhibition | 1203..1239 | CDD:291342 | 35/35 (100%) | ||
LY | 1354..1394 | CDD:214531 | 39/39 (100%) | ||
LY | 1398..1441 | CDD:214531 | 42/42 (100%) | ||
LY | 1442..1486 | CDD:214531 | 42/43 (98%) | ||
LY | 1631..1667 | CDD:214531 | 35/35 (100%) | ||
LY | 1668..1711 | CDD:214531 | 42/42 (100%) | ||
LY | 1715..1752 | CDD:214531 | 35/36 (97%) | ||
LY | 1752..1793 | CDD:214531 | 40/40 (100%) | ||
FXa_inhibition | 1868..1904 | CDD:291342 | 35/35 (100%) | ||
LY | 1934..1974 | CDD:214531 | 39/39 (100%) | ||
LY | 1977..2017 | CDD:214531 | 39/39 (100%) | ||
LY | 2018..2061 | CDD:214531 | 41/42 (98%) | ||
LY | 2063..2105 | CDD:214531 | 39/41 (95%) | ||
FXa_inhibition | 2177..2212 | CDD:291342 | 33/34 (97%) | ||
YvrE | 2271..2481 | CDD:225921 | 204/209 (98%) | ||
Ldl_recept_b | 2362..2403 | CDD:278487 | 39/40 (98%) | ||
LY | 2388..2429 | CDD:214531 | 40/40 (100%) | ||
FXa_inhibition | 2500..2532 | CDD:291342 | 31/31 (100%) | ||
LDLa | 2545..2575 | CDD:238060 | 27/29 (93%) | ||
LDLa | 2584..2618 | CDD:238060 | 31/33 (94%) | ||
LDLa | 2623..2657 | CDD:238060 | 32/33 (97%) | ||
LDLa | <2684..2706 | CDD:238060 | 21/21 (100%) | ||
LDLa | 2714..2748 | CDD:238060 | 32/33 (97%) | ||
LDLa | 2752..2783 | CDD:197566 | 30/30 (100%) | ||
LDLa | 2791..2824 | CDD:197566 | 32/32 (100%) | ||
LDLa | 2835..2867 | CDD:197566 | 30/31 (97%) | ||
LDLa | 2875..2908 | CDD:197566 | 30/32 (94%) | ||
LDLa | 2925..2957 | CDD:238060 | 30/31 (97%) | ||
cEGF | 2980..3003 | CDD:289433 | 22/22 (100%) | ||
EGF_CA | 3000..>3029 | CDD:214542 | 27/28 (96%) | ||
LY | 3067..3111 | CDD:214531 | 42/43 (98%) | ||
LY | 3112..3154 | CDD:214531 | 41/41 (100%) | ||
LY | 3156..3198 | CDD:214531 | 41/41 (100%) | ||
LY | 3200..3241 | CDD:214531 | 38/40 (95%) | ||
LY | 3242..3282 | CDD:214531 | 39/39 (100%) | ||
FXa_inhibition | 3312..3348 | CDD:291342 | 34/35 (97%) | ||
LDLa | 3352..3383 | CDD:238060 | 30/30 (100%) | ||
LDLa | 3392..3426 | CDD:238060 | 33/33 (100%) | ||
LDLa | 3431..3466 | CDD:238060 | 34/34 (100%) | ||
LDLa | 3470..3503 | CDD:197566 | 32/32 (100%) | ||
LDLa | 3511..3544 | CDD:197566 | 32/32 (100%) | ||
LDLa | 3554..3588 | CDD:238060 | 33/33 (100%) | ||
LDLa | 3593..3627 | CDD:238060 | 33/33 (100%) | ||
LDLa | 3631..3665 | CDD:238060 | 33/33 (100%) | ||
LDLa | 3671..3703 | CDD:197566 | 31/31 (100%) | ||
LDLa | 3713..3749 | CDD:238060 | 35/35 (100%) | ||
LDLa | 3764..3794 | CDD:238060 | 29/29 (100%) | ||
LY | 3973..4010 | CDD:214531 | 36/36 (100%) | ||
Ldl_recept_b | 4031..4071 | CDD:278487 | 39/39 (100%) | ||
LY | 4055..4096 | CDD:214531 | 40/40 (100%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C83695809 | |
Domainoid | 1 | 1.000 | 876 | 1.000 | Domainoid score | I2140 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
HGNC | 1 | 1.500 | - | - | ||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H1744 | |
Inparanoid | 1 | 1.050 | 9488 | 1.000 | Inparanoid score | I8 |
NCBI | 1 | 1.000 | - | - | ||
OMA | 1 | 1.010 | - | - | QHG46025 | |
OrthoDB | 1 | 1.010 | - | - | D105at314146 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002316 | |
OrthoInspector | 1 | 1.000 | - | - | oto137708 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24270 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1742 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
18 | 18.270 |