DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppl and gcsha

DIOPT Version :10

Sequence 1:NP_524197.1 Gene:ppl / 40349 FlyBaseID:FBgn0027945 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001013475.1 Gene:gcsha / 541329 ZFINID:ZDB-GENE-050320-18 Length:174 Species:Danio rerio


Alignment Length:162 Identity:74/162 - (45%)
Similarity:101/162 - (62%) Gaps:6/162 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ITKFARIGLQA-ARQLSVTPLGAVQARAIHLTSLLAKERRYTNKHEWVEVVSGSNAIVGISSYAQ 67
            :.:.:.|...| ||.|:.|    ...|::...:......::|:|||||. |.|..|.||||::||
Zfish    18 LPRLSNINAHAPARLLART----CYRRSLSTNTPFCAALKFTDKHEWVR-VDGGVATVGISNFAQ 77

  Fly    68 EALGDVVFAQLPEPGTELKQDDECGALESVKAASEVYSPVSGKVIEKNAEVEDTPALVNSSCYEK 132
            |||||||:..|||.|.:|.|.|..|||||||||||:|||::|:|.:.|..:.|.|.|||.|||..
Zfish    78 EALGDVVYCGLPEIGAKLSQTDGFGALESVKAASELYSPLTGEVTDANDALADNPGLVNKSCYND 142

  Fly   133 GWLFKVDLKNPKELEALMTEDQYKAFLSSSGD 164
            |||.|:.:..|:||:.||.|..|:.::.|..|
Zfish   143 GWLMKMTVSIPEELDGLMDEAAYERYIKSIED 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pplNP_524197.1 GcvH 39..159 CDD:440275 65/119 (55%)
gcshaNP_001013475.1 PRK01202 52..171 CDD:234918 65/119 (55%)

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