DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppl and gcsh

DIOPT Version :10

Sequence 1:NP_524197.1 Gene:ppl / 40349 FlyBaseID:FBgn0027945 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001011024.1 Gene:gcsh / 496433 XenbaseID:XB-GENE-956061 Length:170 Species:Xenopus tropicalis


Alignment Length:166 Identity:73/166 - (43%)
Similarity:102/166 - (61%) Gaps:14/166 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LQAARQLSVTPLGAVQARAIHL-------------TSLLAKERRYTNKHEWVEVVSGSNAIVGIS 63
            |.|.|.||...|....|:...|             :.||:...::|:||||:.|.:|... ||||
 Frog     6 LSAMRVLSTVTLVRRPAQECRLVWRSCLVRSLATGSQLLSSALKFTDKHEWISVENGIGT-VGIS 69

  Fly    64 SYAQEALGDVVFAQLPEPGTELKQDDECGALESVKAASEVYSPVSGKVIEKNAEVEDTPALVNSS 128
            .:||::||:||:..|||.|.:|.:.||.|.||||||.||:|||::|:|.|.|..:.|.|.|||.|
 Frog    70 KFAQDSLGEVVYCSLPEVGKKLNKMDEFGTLESVKAVSELYSPLTGEVTEINGALTDNPGLVNQS 134

  Fly   129 CYEKGWLFKVDLKNPKELEALMTEDQYKAFLSSSGD 164
            |||:|||.|:.:.||.||:.||:||.|:.::.:..|
 Frog   135 CYEEGWLIKLTVDNPSELDDLMSEDAYEKYVKALED 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pplNP_524197.1 GcvH 39..159 CDD:440275 62/119 (52%)
gcshNP_001011024.1 GcvH 48..168 CDD:440275 62/120 (52%)

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