DRSC/TRiP Functional Genomics Resources

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Protein Alignment AcCoAS and Acsm1

DIOPT Version :9

Sequence 1:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001101972.2 Gene:Acsm1 / 361638 RGDID:1306813 Length:577 Species:Rattus norvegicus


Alignment Length:634 Identity:175/634 - (27%)
Similarity:269/634 - (42%) Gaps:120/634 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TPADQDKFLKYNFNISKGPISIKWM---EGAST----------NLCYNLLD------RNVRNGLG 97
            ||....||| :.|::.: |...:|:   :||..          |...::||      ...:.|.|
  Rat     9 TPLGICKFL-HRFSLHR-PQLHRWLISGDGAQRWNDYDSPEEFNFASHVLDYWAQMEGEGKRGPG 71

  Fly    98 DQIAYYWEGNHPDDYSRGLTYRKLLEEVCRFANVLKDH-GIRKGDRVSIYMPMILELPIAMLACA 161
            .  |.:|..:..|:..  .::|:|.:...|.|||.:.. |::.|||:::.:|.:.|..:..:.|.
  Rat    72 P--ALWWVNDQGDEIK--WSFRELRDLSRRAANVFEQTCGLQHGDRLALILPRVPEWWLVTVGCI 132

  Fly   162 RIGAVHSIVFAGFSPDSLAERMFDCKAKLLITADGAWRGEKPLYLKALCDTALEKVEEMGHSVEK 226
            |.|.:.....|......:..|:...:||.::|.|..                   |.|:.....:
  Rat   133 RTGVIFIPGTAQMKAKDILYRIQMSQAKAIVTTDSL-------------------VPEVESVASE 178

  Fly   227 C------IVVSHLKRVTPCQPDHVEEEIPWTDDRDYWWHEEMEDKEP--ACYPEWMDAEDPLFML 283
            |      ||||          ||..|  .|.:.|..     :....|  .|....|  :||:.:.
  Rat   179 CPGLKTKIVVS----------DHNHE--GWLNFRTL-----LRSASPDHTCVKSKM--KDPMVIF 224

  Fly   284 YTSGSTGKPKGVLHTTAGYLLYAATTFKIVFDYKPGDIYWCTGDVGWITGHTYVVYGPLANGATS 348
            :|||:||.||...|........:..:.:.....|..|:.||..|.|||......:..|...|||.
  Rat   225 FTSGTTGYPKMAKHNQGLAFRSSVPSCRKFLKLKTSDVIWCMSDPGWILATVGCLLEPWTAGATV 289

  Fly   349 VIFEGTPFFPGNDRYWSVI----DKYKVTQFYTAPTAIRAL-------MKFGEGPVLKHNLSGLK 402
            .:.....|.|      .||    .||.:||...||...|.:       ::|   |.|:|..:|  
  Rat   290 FVHNLPQFDP------KVIVETLFKYPITQCLAAPAVYRMVLQKNISNLRF---PTLEHCATG-- 343

  Fly   403 VLGSVGEPINPEAWLWYYKYIGKEQCSIVDTFWQTETGGHVITPLPGATPMKPGS---ASFPFFG 464
                 ||.:.||.   |.::..:...||.:.:.|:|||  :...:.....:|.||   |..||  
  Rat   344 -----GESLLPEE---YEQWKQRTGLSIHEVYGQSETG--ITCAIFREMKVKRGSIGKAILPF-- 396

  Fly   465 VKPTLLDECGIEIKGEGEGYLVF----SQPWPGMMRTLYNNHERFEDTYFSKFPGYYCTGDGARR 525
             ...::||.|..:....|||:..    ::|. |:.....|:.|:..:.....|   |.:||.|..
  Rat   397 -DIQIIDEKGNILPPNTEGYIGIRIKPTRPL-GLFVGYENSPEKTSEVECGDF---YNSGDRATI 456

  Fly   526 DADGYLWITGRVDDMLNVSGHLMSTAEVESVLTEHPRVAESAVVSRPHPVKGECLYCFITPN-EN 589
            |.|||:|..||.||::|.||:.:...|||:.|.|||.|:||||||.|...:||.:..||..| |.
  Rat   457 DEDGYIWFLGRSDDVINASGYRIGPTEVENALVEHPAVSESAVVSSPDKDRGEVVKAFIVLNPEF 521

  Fly   590 EVFDQ-KLISDLKKMVRERIGPFAMPDVIQNAPGLPKTRSGKIMRRVLR 637
            ...|| :||.:|::.|:....|:..|..::....||||.:|||.|:.||
  Rat   522 LSHDQEQLIKELQEHVKSVTAPYKYPRKVEFVSELPKTITGKIKRKELR 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 175/634 (28%)
ACS 30..654 CDD:213313 175/634 (28%)
Acsm1NP_001101972.2 AFD_class_I 46..573 CDD:302604 165/595 (28%)
Acs 46..570 CDD:223442 163/593 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0365
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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